Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.1■□□□□ 0.33
GRIK1P39086 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GRIK1P39086 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GRIK1P39086 NFIC-211ENST00000641145 8399 ntBASIC17.1■□□□□ 0.33
GRIK1P39086 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GRIK1P39086 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GRIK1P39086 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC17.1■□□□□ 0.33
GRIK1P39086 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.1■□□□□ 0.33
GRIK1P39086 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
GRIK1P39086 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GRIK1P39086 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GRIK1P39086 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GRIK1P39086 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GRIK1P39086 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GRIK1P39086 PCDHA14-201ENST00000506751 2298 ntBASIC17.09■□□□□ 0.33
GRIK1P39086 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GRIK1P39086 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GRIK1P39086 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GRIK1P39086 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
GRIK1P39086 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.09■□□□□ 0.33
GRIK1P39086 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GRIK1P39086 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GRIK1P39086 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GRIK1P39086 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC17.09■□□□□ 0.33
GRIK1P39086 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC17.09■□□□□ 0.33
GRIK1P39086 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.09■□□□□ 0.33
GRIK1P39086 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GRIK1P39086 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.09■□□□□ 0.33
GRIK1P39086 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GRIK1P39086 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.09■□□□□ 0.33
GRIK1P39086 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.09■□□□□ 0.33
GRIK1P39086 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.09■□□□□ 0.33
GRIK1P39086 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.09■□□□□ 0.33
GRIK1P39086 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.09■□□□□ 0.33
GRIK1P39086 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GRIK1P39086 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.09■□□□□ 0.33
GRIK1P39086 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GRIK1P39086 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.09■□□□□ 0.33
GRIK1P39086 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.09■□□□□ 0.33
GRIK1P39086 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GRIK1P39086 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GRIK1P39086 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.09■□□□□ 0.33
GRIK1P39086 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.09■□□□□ 0.33
GRIK1P39086 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.09■□□□□ 0.33
GRIK1P39086 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.09■□□□□ 0.33
GRIK1P39086 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GRIK1P39086 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
GRIK1P39086 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GRIK1P39086 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GRIK1P39086 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GRIK1P39086 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GRIK1P39086 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
GRIK1P39086 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GRIK1P39086 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC17.08■□□□□ 0.33
GRIK1P39086 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GRIK1P39086 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.08■□□□□ 0.33
GRIK1P39086 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.08■□□□□ 0.33
GRIK1P39086 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GRIK1P39086 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GRIK1P39086 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.08■□□□□ 0.33
GRIK1P39086 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GRIK1P39086 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GRIK1P39086 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
GRIK1P39086 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GRIK1P39086 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
GRIK1P39086 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GRIK1P39086 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GRIK1P39086 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
GRIK1P39086 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.08■□□□□ 0.32
GRIK1P39086 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.08■□□□□ 0.32
GRIK1P39086 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GRIK1P39086 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.08■□□□□ 0.32
GRIK1P39086 TSSK5P-201ENST00000423978 907 ntBASIC17.08■□□□□ 0.32
GRIK1P39086 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.08■□□□□ 0.32
GRIK1P39086 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.08■□□□□ 0.32
GRIK1P39086 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.08■□□□□ 0.32
GRIK1P39086 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.08■□□□□ 0.32
GRIK1P39086 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.08■□□□□ 0.32
GRIK1P39086 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.08■□□□□ 0.32
GRIK1P39086 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
GRIK1P39086 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.32
GRIK1P39086 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GRIK1P39086 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
GRIK1P39086 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
GRIK1P39086 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GRIK1P39086 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.08■□□□□ 0.32
GRIK1P39086 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GRIK1P39086 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
GRIK1P39086 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
GRIK1P39086 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GRIK1P39086 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
GRIK1P39086 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC17.07■□□□□ 0.32
GRIK1P39086 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 AC087499.5-201ENST00000452760 1342 ntBASIC17.07■□□□□ 0.32
GRIK1P39086 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GRIK1P39086 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms