Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.15■□□□□ 0.18
HMGCLP35914 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.15■□□□□ 0.18
HMGCLP35914 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
HMGCLP35914 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
HMGCLP35914 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HMGCLP35914 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 AC069224.1-201ENST00000566372 1715 ntBASIC16.14■□□□□ 0.17
HMGCLP35914 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGCLP35914 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGCLP35914 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
HMGCLP35914 AL691432.1-201ENST00000596308 1422 ntBASIC16.14■□□□□ 0.17
HMGCLP35914 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
HMGCLP35914 AC008894.3-201ENST00000624324 3103 ntBASIC16.14■□□□□ 0.17
HMGCLP35914 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.14■□□□□ 0.17
HMGCLP35914 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGCLP35914 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.14■□□□□ 0.17
HMGCLP35914 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.14■□□□□ 0.17
HMGCLP35914 AL139010.1-201ENST00000454878 894 ntBASIC16.14■□□□□ 0.17
HMGCLP35914 LINC02447-202ENST00000501888 2146 ntBASIC16.14■□□□□ 0.17
HMGCLP35914 AC015911.4-201ENST00000588022 1070 ntBASIC16.14■□□□□ 0.17
HMGCLP35914 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
HMGCLP35914 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.14■□□□□ 0.17
HMGCLP35914 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGCLP35914 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.14■□□□□ 0.17
HMGCLP35914 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.14■□□□□ 0.17
HMGCLP35914 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.14■□□□□ 0.17
HMGCLP35914 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.14■□□□□ 0.17
HMGCLP35914 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
HMGCLP35914 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.13■□□□□ 0.17
HMGCLP35914 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HMGCLP35914 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.13■□□□□ 0.17
HMGCLP35914 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
HMGCLP35914 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
HMGCLP35914 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
HMGCLP35914 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HMGCLP35914 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
HMGCLP35914 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.13■□□□□ 0.17
HMGCLP35914 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 AC243562.2-201ENST00000561247 970 ntBASIC16.13■□□□□ 0.17
HMGCLP35914 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.13■□□□□ 0.17
HMGCLP35914 AC105021.1-202ENST00000570572 669 ntBASIC16.13■□□□□ 0.17
HMGCLP35914 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.13■□□□□ 0.17
HMGCLP35914 AC003101.2-201ENST00000612557 442 ntBASIC16.13■□□□□ 0.17
HMGCLP35914 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.13■□□□□ 0.17
HMGCLP35914 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
HMGCLP35914 MIR6080-201ENST00000617359 66 ntBASIC16.13■□□□□ 0.17
HMGCLP35914 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.13■□□□□ 0.17
HMGCLP35914 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.13■□□□□ 0.17
HMGCLP35914 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.13■□□□□ 0.17
HMGCLP35914 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.13■□□□□ 0.17
HMGCLP35914 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
HMGCLP35914 AL035456.1-201ENST00000456064 1369 ntBASIC16.13■□□□□ 0.17
HMGCLP35914 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HMGCLP35914 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
HMGCLP35914 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
HMGCLP35914 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
HMGCLP35914 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms