Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
RPA3P35244 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.49■□□□□ 0.23
RPA3P35244 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
RPA3P35244 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 AC023157.3-201ENST00000619086 2088 ntBASIC16.49■□□□□ 0.23
RPA3P35244 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
RPA3P35244 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
RPA3P35244 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
RPA3P35244 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.48■□□□□ 0.23
RPA3P35244 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
RPA3P35244 SSR4P1-203ENST00000599569 2260 ntBASIC16.48■□□□□ 0.23
RPA3P35244 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RPA3P35244 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RPA3P35244 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RPA3P35244 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RPA3P35244 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.48■□□□□ 0.23
RPA3P35244 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
RPA3P35244 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.48■□□□□ 0.23
RPA3P35244 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.48■□□□□ 0.23
RPA3P35244 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.48■□□□□ 0.23
RPA3P35244 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.48■□□□□ 0.23
RPA3P35244 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.48■□□□□ 0.23
RPA3P35244 AC108751.1-201ENST00000490852 363 ntBASIC16.48■□□□□ 0.23
RPA3P35244 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.48■□□□□ 0.23
RPA3P35244 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.48■□□□□ 0.23
RPA3P35244 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.48■□□□□ 0.23
RPA3P35244 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC16.48■□□□□ 0.23
RPA3P35244 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.48■□□□□ 0.23
RPA3P35244 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.48■□□□□ 0.23
RPA3P35244 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.48■□□□□ 0.23
RPA3P35244 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.48■□□□□ 0.23
RPA3P35244 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.48■□□□□ 0.23
RPA3P35244 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.48■□□□□ 0.23
RPA3P35244 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.48■□□□□ 0.23
RPA3P35244 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RPA3P35244 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.48■□□□□ 0.23
RPA3P35244 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.48■□□□□ 0.23
RPA3P35244 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.48■□□□□ 0.23
RPA3P35244 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RPA3P35244 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPA3P35244 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.47■□□□□ 0.23
RPA3P35244 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPA3P35244 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPA3P35244 IL9RP2-201ENST00000423948 1312 ntBASIC16.47■□□□□ 0.23
RPA3P35244 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPA3P35244 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPA3P35244 AC136621.1-201ENST00000624017 2304 ntBASIC16.47■□□□□ 0.23
RPA3P35244 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.47■□□□□ 0.23
RPA3P35244 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.47■□□□□ 0.23
RPA3P35244 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPA3P35244 SLC22A20-204ENST00000530038 1673 ntBASIC16.47■□□□□ 0.23
RPA3P35244 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RPA3P35244 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPA3P35244 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RPA3P35244 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RPA3P35244 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPA3P35244 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
RPA3P35244 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
RPA3P35244 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.47■□□□□ 0.23
RPA3P35244 MIR648-201ENST00000385046 94 ntBASIC16.47■□□□□ 0.23
RPA3P35244 MRPL20P1-201ENST00000400819 433 ntBASIC16.47■□□□□ 0.23
RPA3P35244 AC087163.2-201ENST00000457299 853 ntBASIC16.47■□□□□ 0.23
RPA3P35244 AC108073.2-201ENST00000464002 357 ntBASIC16.47■□□□□ 0.23
RPA3P35244 RNA5SP415-201ENST00000517246 115 ntBASIC16.47■□□□□ 0.23
RPA3P35244 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.47■□□□□ 0.23
RPA3P35244 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.47■□□□□ 0.23
RPA3P35244 IGHV3-22-201ENST00000520721 359 ntBASIC16.47■□□□□ 0.23
RPA3P35244 UNC93B6-202ENST00000528242 690 ntBASIC16.47■□□□□ 0.23
RPA3P35244 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.47■□□□□ 0.23
RPA3P35244 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.47■□□□□ 0.23
RPA3P35244 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.47■□□□□ 0.23
RPA3P35244 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RPA3P35244 CYP2A7P1-201ENST00000595391 815 ntBASIC16.47■□□□□ 0.23
RPA3P35244 AC120114.3-201ENST00000611923 658 ntBASIC16.47■□□□□ 0.23
RPA3P35244 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.47■□□□□ 0.23
RPA3P35244 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms