Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.36■□□□□ 0.21
LSP1P33241 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.36■□□□□ 0.21
LSP1P33241 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
LSP1P33241 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.36■□□□□ 0.21
LSP1P33241 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.36■□□□□ 0.21
LSP1P33241 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.36■□□□□ 0.21
LSP1P33241 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.36■□□□□ 0.21
LSP1P33241 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.36■□□□□ 0.21
LSP1P33241 AC005363.2-201ENST00000618631 242 ntBASIC16.36■□□□□ 0.21
LSP1P33241 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LSP1P33241 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LSP1P33241 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LSP1P33241 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
LSP1P33241 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
LSP1P33241 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
LSP1P33241 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LSP1P33241 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
LSP1P33241 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC16.35■□□□□ 0.21
LSP1P33241 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.35■□□□□ 0.21
LSP1P33241 MROH4P-201ENST00000431302 1578 ntBASIC16.35■□□□□ 0.21
LSP1P33241 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 AJ011931.1-201ENST00000618749 2492 ntBASIC16.35■□□□□ 0.21
LSP1P33241 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.35■□□□□ 0.21
LSP1P33241 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.35■□□□□ 0.21
LSP1P33241 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 AC211429.1-201ENST00000415277 523 ntBASIC16.35■□□□□ 0.21
LSP1P33241 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.35■□□□□ 0.21
LSP1P33241 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.35■□□□□ 0.21
LSP1P33241 RNF126P1-202ENST00000569893 925 ntBASIC16.35■□□□□ 0.21
LSP1P33241 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.35■□□□□ 0.21
LSP1P33241 AC092127.1-201ENST00000567093 3455 ntBASIC16.35■□□□□ 0.21
LSP1P33241 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
LSP1P33241 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.35■□□□□ 0.21
LSP1P33241 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.35■□□□□ 0.21
LSP1P33241 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.35■□□□□ 0.21
LSP1P33241 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.35■□□□□ 0.21
LSP1P33241 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
LSP1P33241 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LSP1P33241 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.35■□□□□ 0.21
LSP1P33241 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LSP1P33241 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.34■□□□□ 0.21
LSP1P33241 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LSP1P33241 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LSP1P33241 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.34■□□□□ 0.21
LSP1P33241 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LSP1P33241 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.34■□□□□ 0.21
LSP1P33241 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LSP1P33241 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
LSP1P33241 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.34■□□□□ 0.21
LSP1P33241 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.34■□□□□ 0.21
LSP1P33241 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LSP1P33241 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms