Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN3P26045 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PTPN3P26045 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.57■□□□□ 0.24
PTPN3P26045 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN3P26045 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
PTPN3P26045 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 GPX1P2-201ENST00000429271 606 ntBASIC16.57■□□□□ 0.24
PTPN3P26045 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN3P26045 TIMM8BP1-201ENST00000452384 211 ntBASIC16.57■□□□□ 0.24
PTPN3P26045 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN3P26045 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.57■□□□□ 0.24
PTPN3P26045 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN3P26045 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.57■□□□□ 0.24
PTPN3P26045 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.57■□□□□ 0.24
PTPN3P26045 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.57■□□□□ 0.24
PTPN3P26045 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PTPN3P26045 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
PTPN3P26045 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN3P26045 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.57■□□□□ 0.24
PTPN3P26045 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
PTPN3P26045 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN3P26045 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.57■□□□□ 0.24
PTPN3P26045 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.57■□□□□ 0.24
PTPN3P26045 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.57■□□□□ 0.24
PTPN3P26045 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
PTPN3P26045 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
PTPN3P26045 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PTPN3P26045 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.57■□□□□ 0.24
PTPN3P26045 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN3P26045 CICP6-201ENST00000457191 2729 ntBASIC16.56■□□□□ 0.24
PTPN3P26045 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN3P26045 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
PTPN3P26045 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN3P26045 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.56■□□□□ 0.24
PTPN3P26045 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PTPN3P26045 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN3P26045 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN3P26045 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN3P26045 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN3P26045 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN3P26045 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN3P26045 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN3P26045 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN3P26045 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PTPN3P26045 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN3P26045 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.56■□□□□ 0.24
PTPN3P26045 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.56■□□□□ 0.24
PTPN3P26045 AP000842.3-202ENST00000569238 1080 ntBASIC16.56■□□□□ 0.24
PTPN3P26045 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
PTPN3P26045 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN3P26045 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN3P26045 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.56■□□□□ 0.24
PTPN3P26045 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PTPN3P26045 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN3P26045 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC16.56■□□□□ 0.24
PTPN3P26045 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTPN3P26045 ELL2P1-201ENST00000413990 1906 ntBASIC16.56■□□□□ 0.24
PTPN3P26045 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN3P26045 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN3P26045 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.56■□□□□ 0.24
PTPN3P26045 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN3P26045 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN3P26045 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN3P26045 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN3P26045 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC16.56■□□□□ 0.24
PTPN3P26045 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
PTPN3P26045 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN3P26045 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN3P26045 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN3P26045 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN3P26045 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN3P26045 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PTPN3P26045 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN3P26045 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN3P26045 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPN3P26045 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTPN3P26045 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN3P26045 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN3P26045 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
PTPN3P26045 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTPN3P26045 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN3P26045 MIR346-201ENST00000362234 95 ntBASIC16.55■□□□□ 0.24
PTPN3P26045 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PTPN3P26045 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN3P26045 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN3P26045 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN3P26045 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPN3P26045 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPN3P26045 AC061975.2-201ENST00000581722 295 ntBASIC16.55■□□□□ 0.24
PTPN3P26045 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN3P26045 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms