Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.8□□□□□ -0.2
VAMP1P23763 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.8□□□□□ -0.2
VAMP1P23763 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.8□□□□□ -0.2
VAMP1P23763 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
VAMP1P23763 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC13.8□□□□□ -0.2
VAMP1P23763 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
VAMP1P23763 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.8□□□□□ -0.2
VAMP1P23763 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC13.8□□□□□ -0.2
VAMP1P23763 AL592071.1-201ENST00000611956 408 ntBASIC13.8□□□□□ -0.2
VAMP1P23763 LINC01144-201ENST00000626198 1710 ntBASIC13.8□□□□□ -0.2
VAMP1P23763 AC006486.2-201ENST00000624246 2199 ntBASIC13.8□□□□□ -0.2
VAMP1P23763 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.8□□□□□ -0.2
VAMP1P23763 AC006480.2-201ENST00000609770 1337 ntBASIC13.8□□□□□ -0.2
VAMP1P23763 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC13.8□□□□□ -0.2
VAMP1P23763 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
VAMP1P23763 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
VAMP1P23763 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
VAMP1P23763 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
VAMP1P23763 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC13.8□□□□□ -0.2
VAMP1P23763 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
VAMP1P23763 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.8□□□□□ -0.2
VAMP1P23763 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
VAMP1P23763 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC13.79□□□□□ -0.2
VAMP1P23763 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.79□□□□□ -0.2
VAMP1P23763 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.79□□□□□ -0.2
VAMP1P23763 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC13.79□□□□□ -0.2
VAMP1P23763 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.79□□□□□ -0.2
VAMP1P23763 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.79□□□□□ -0.2
VAMP1P23763 AC009533.2-201ENST00000543664 586 ntBASIC13.79□□□□□ -0.2
VAMP1P23763 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC13.79□□□□□ -0.2
VAMP1P23763 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC13.79□□□□□ -0.2
VAMP1P23763 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC13.79□□□□□ -0.2
VAMP1P23763 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.79□□□□□ -0.2
VAMP1P23763 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
VAMP1P23763 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
VAMP1P23763 AC011558.1-201ENST00000623459 338 ntBASIC13.79□□□□□ -0.2
VAMP1P23763 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.79□□□□□ -0.2
VAMP1P23763 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.79□□□□□ -0.2
VAMP1P23763 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 DUSP10-201ENST00000366899 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
VAMP1P23763 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.79□□□□□ -0.2
VAMP1P23763 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
VAMP1P23763 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 AC243591.1-201ENST00000452967 1364 ntBASIC13.79□□□□□ -0.2
VAMP1P23763 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
VAMP1P23763 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.79□□□□□ -0.2
VAMP1P23763 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.79□□□□□ -0.2
VAMP1P23763 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.79□□□□□ -0.2
VAMP1P23763 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 RPL23A-204ENST00000422514 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
VAMP1P23763 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms