Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.95□□□□□ -0.18
TNFSF4P23510 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 FLJ38576-201ENST00000623820 2459 ntBASIC13.95□□□□□ -0.18
TNFSF4P23510 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TNFSF4P23510 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC13.95□□□□□ -0.18
TNFSF4P23510 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC13.94□□□□□ -0.18
TNFSF4P23510 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.94□□□□□ -0.18
TNFSF4P23510 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
TNFSF4P23510 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
TNFSF4P23510 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.94□□□□□ -0.18
TNFSF4P23510 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC13.94□□□□□ -0.18
TNFSF4P23510 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
TNFSF4P23510 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
TNFSF4P23510 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.94□□□□□ -0.18
TNFSF4P23510 AC093724.1-201ENST00000448659 1027 ntBASIC13.94□□□□□ -0.18
TNFSF4P23510 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC13.94□□□□□ -0.18
TNFSF4P23510 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
TNFSF4P23510 AC069335.1-201ENST00000489972 472 ntBASIC13.94□□□□□ -0.18
TNFSF4P23510 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.94□□□□□ -0.18
TNFSF4P23510 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
TNFSF4P23510 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC13.94□□□□□ -0.18
TNFSF4P23510 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
TNFSF4P23510 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC13.94□□□□□ -0.18
TNFSF4P23510 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.94□□□□□ -0.18
TNFSF4P23510 AC005622.1-201ENST00000636801 1703 ntBASIC13.94□□□□□ -0.18
TNFSF4P23510 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.94□□□□□ -0.18
TNFSF4P23510 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.94□□□□□ -0.18
TNFSF4P23510 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC13.94□□□□□ -0.18
TNFSF4P23510 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TNFSF4P23510 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.94□□□□□ -0.18
TNFSF4P23510 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.94□□□□□ -0.18
TNFSF4P23510 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
TNFSF4P23510 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFSF4P23510 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
TNFSF4P23510 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TNFSF4P23510 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TNFSF4P23510 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFSF4P23510 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
TNFSF4P23510 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TNFSF4P23510 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TNFSF4P23510 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFSF4P23510 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC13.93□□□□□ -0.18
TNFSF4P23510 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC13.93□□□□□ -0.18
TNFSF4P23510 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
TNFSF4P23510 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFSF4P23510 HLA-H-201ENST00000383620 1096 ntBASIC13.93□□□□□ -0.18
TNFSF4P23510 TSEN15P1-201ENST00000423257 515 ntBASIC13.93□□□□□ -0.18
TNFSF4P23510 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.93□□□□□ -0.18
TNFSF4P23510 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFSF4P23510 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.93□□□□□ -0.18
TNFSF4P23510 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.93□□□□□ -0.18
TNFSF4P23510 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.93□□□□□ -0.18
TNFSF4P23510 AC025678.2-201ENST00000562061 970 ntBASIC13.93□□□□□ -0.18
TNFSF4P23510 LINC01225-203ENST00000563550 1244 ntBASIC13.93□□□□□ -0.18
TNFSF4P23510 AC004449.1-201ENST00000564240 433 ntBASIC13.93□□□□□ -0.18
TNFSF4P23510 AL138918.1-201ENST00000568306 659 ntBASIC13.93□□□□□ -0.18
TNFSF4P23510 AL365330.1-201ENST00000607459 531 ntBASIC13.93□□□□□ -0.18
TNFSF4P23510 AC009093.7-201ENST00000623853 1223 ntBASIC13.93□□□□□ -0.18
TNFSF4P23510 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFSF4P23510 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.93□□□□□ -0.18
TNFSF4P23510 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TNFSF4P23510 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms