Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
RAB4AP20338 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB4AP20338 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 AC006486.2-201ENST00000624246 2199 ntBASIC12.53□□□□□ -0.4
RAB4AP20338 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB4AP20338 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 MYCLP1-201ENST00000372451 1075 ntBASIC12.53□□□□□ -0.4
RAB4AP20338 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB4AP20338 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB4AP20338 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB4AP20338 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB4AP20338 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB4AP20338 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.53□□□□□ -0.4
RAB4AP20338 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC12.53□□□□□ -0.4
RAB4AP20338 AL359736.2-201ENST00000621992 437 ntBASIC12.53□□□□□ -0.4
RAB4AP20338 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
RAB4AP20338 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB4AP20338 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
RAB4AP20338 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
RAB4AP20338 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.53□□□□□ -0.4
RAB4AP20338 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.52□□□□□ -0.4
RAB4AP20338 UCKL1-AS1-201ENST00000623569 3602 ntBASIC12.52□□□□□ -0.4
RAB4AP20338 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.52□□□□□ -0.4
RAB4AP20338 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.52□□□□□ -0.4
RAB4AP20338 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.4
RAB4AP20338 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB4AP20338 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB4AP20338 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB4AP20338 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB4AP20338 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
RAB4AP20338 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
RAB4AP20338 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.4
RAB4AP20338 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB4AP20338 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.52□□□□□ -0.4
RAB4AP20338 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
RAB4AP20338 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
RAB4AP20338 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
RAB4AP20338 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
RAB4AP20338 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 AC009947.2-201ENST00000444014 672 ntBASIC12.52□□□□□ -0.41
RAB4AP20338 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB4AP20338 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC12.52□□□□□ -0.41
RAB4AP20338 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB4AP20338 TK1-205ENST00000590862 642 ntTSL 3 BASIC12.52□□□□□ -0.41
RAB4AP20338 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
RAB4AP20338 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB4AP20338 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.41
RAB4AP20338 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB4AP20338 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB4AP20338 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
RAB4AP20338 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.52□□□□□ -0.41
RAB4AP20338 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RAB4AP20338 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
RAB4AP20338 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC12.52□□□□□ -0.41
RAB4AP20338 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
RAB4AP20338 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
RAB4AP20338 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.52□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms