Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.4■□□□□ 0.22
VCLP18206 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
VCLP18206 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.4■□□□□ 0.22
VCLP18206 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.4■□□□□ 0.22
VCLP18206 AL671277.1-201ENST00000429656 993 ntBASIC16.4■□□□□ 0.22
VCLP18206 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.4■□□□□ 0.22
VCLP18206 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
VCLP18206 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.4■□□□□ 0.22
VCLP18206 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC16.4■□□□□ 0.22
VCLP18206 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.4■□□□□ 0.22
VCLP18206 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.4■□□□□ 0.22
VCLP18206 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
VCLP18206 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.4■□□□□ 0.22
VCLP18206 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.4■□□□□ 0.22
VCLP18206 AC134684.3-201ENST00000641758 218 ntBASIC16.4■□□□□ 0.22
VCLP18206 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
VCLP18206 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.4■□□□□ 0.22
VCLP18206 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 AC099063.4-201ENST00000641099 1602 ntBASIC16.4■□□□□ 0.22
VCLP18206 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.4■□□□□ 0.22
VCLP18206 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.4■□□□□ 0.22
VCLP18206 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
VCLP18206 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VCLP18206 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VCLP18206 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.39■□□□□ 0.21
VCLP18206 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VCLP18206 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
VCLP18206 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.39■□□□□ 0.21
VCLP18206 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.39■□□□□ 0.21
VCLP18206 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
VCLP18206 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
VCLP18206 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
VCLP18206 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.39■□□□□ 0.21
VCLP18206 AC092474.2-201ENST00000424288 719 ntBASIC16.39■□□□□ 0.21
VCLP18206 AP006288.1-201ENST00000446065 395 ntBASIC16.39■□□□□ 0.21
VCLP18206 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.39■□□□□ 0.21
VCLP18206 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.39■□□□□ 0.21
VCLP18206 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.39■□□□□ 0.21
VCLP18206 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.39■□□□□ 0.21
VCLP18206 SNHG9-202ENST00000564014 471 ntBASIC16.39■□□□□ 0.21
VCLP18206 RARRES2P8-201ENST00000566335 367 ntBASIC16.39■□□□□ 0.21
VCLP18206 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.39■□□□□ 0.21
VCLP18206 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.39■□□□□ 0.21
VCLP18206 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.39■□□□□ 0.21
VCLP18206 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.39■□□□□ 0.21
VCLP18206 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VCLP18206 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
VCLP18206 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
VCLP18206 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.39■□□□□ 0.21
VCLP18206 FLJ16779-201ENST00000612722 7638 ntBASIC16.39■□□□□ 0.21
VCLP18206 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.39■□□□□ 0.21
VCLP18206 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.39■□□□□ 0.21
VCLP18206 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 AKAP8P1-201ENST00000434743 1349 ntBASIC16.39■□□□□ 0.21
VCLP18206 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
VCLP18206 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms