Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
HMGA1P17096 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HMGA1P17096 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGA1P17096 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HMGA1P17096 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA1P17096 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
HMGA1P17096 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA1P17096 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
HMGA1P17096 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA1P17096 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA1P17096 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA1P17096 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA1P17096 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
HMGA1P17096 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HMGA1P17096 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.7■□□□□ 0.26
HMGA1P17096 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGA1P17096 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGA1P17096 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
HMGA1P17096 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HMGA1P17096 AC006449.6-201ENST00000612330 2296 ntBASIC16.7■□□□□ 0.26
HMGA1P17096 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.7■□□□□ 0.26
HMGA1P17096 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGA1P17096 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HMGA1P17096 AC244107.1-201ENST00000442033 332 ntBASIC16.7■□□□□ 0.26
HMGA1P17096 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.7■□□□□ 0.26
HMGA1P17096 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.7■□□□□ 0.26
HMGA1P17096 KRT17P7-201ENST00000451704 1104 ntBASIC16.7■□□□□ 0.26
HMGA1P17096 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGA1P17096 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.7■□□□□ 0.26
HMGA1P17096 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HMGA1P17096 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGA1P17096 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGA1P17096 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.7■□□□□ 0.26
HMGA1P17096 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 RRP7BP-205ENST00000566851 833 ntBASIC16.7■□□□□ 0.26
HMGA1P17096 AC093726.1-201ENST00000608064 963 ntBASIC16.7■□□□□ 0.26
HMGA1P17096 MIR8072-201ENST00000614241 80 ntBASIC16.7■□□□□ 0.26
HMGA1P17096 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGA1P17096 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
HMGA1P17096 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.7■□□□□ 0.26
HMGA1P17096 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA1P17096 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA1P17096 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA1P17096 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
HMGA1P17096 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA1P17096 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA1P17096 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGA1P17096 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGA1P17096 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA1P17096 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
HMGA1P17096 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA1P17096 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA1P17096 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
HMGA1P17096 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA1P17096 U91328.1-201ENST00000437528 223 ntBASIC16.69■□□□□ 0.26
HMGA1P17096 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA1P17096 RN7SL752P-201ENST00000463779 287 ntBASIC16.69■□□□□ 0.26
HMGA1P17096 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGA1P17096 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.69■□□□□ 0.26
HMGA1P17096 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.69■□□□□ 0.26
HMGA1P17096 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC16.69■□□□□ 0.26
HMGA1P17096 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA1P17096 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA1P17096 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
HMGA1P17096 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.69■□□□□ 0.26
HMGA1P17096 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.69■□□□□ 0.26
HMGA1P17096 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
HMGA1P17096 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA1P17096 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA1P17096 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA1P17096 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA1P17096 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.68■□□□□ 0.26
HMGA1P17096 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGA1P17096 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA1P17096 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA1P17096 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA1P17096 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA1P17096 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA1P17096 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
HMGA1P17096 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
HMGA1P17096 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.68■□□□□ 0.26
HMGA1P17096 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
HMGA1P17096 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms