Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CD28P10747 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.71□□□□□ -0.37
CD28P10747 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC12.71□□□□□ -0.37
CD28P10747 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD28P10747 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.71□□□□□ -0.37
CD28P10747 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD28P10747 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD28P10747 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD28P10747 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CD28P10747 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CD28P10747 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.71□□□□□ -0.37
CD28P10747 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD28P10747 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD28P10747 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD28P10747 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC12.71□□□□□ -0.37
CD28P10747 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CD28P10747 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC12.71□□□□□ -0.37
CD28P10747 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD28P10747 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.71□□□□□ -0.37
CD28P10747 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC12.71□□□□□ -0.37
CD28P10747 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC12.71□□□□□ -0.37
CD28P10747 SPTLC1P1-201ENST00000447199 261 ntBASIC12.71□□□□□ -0.37
CD28P10747 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CD28P10747 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC12.71□□□□□ -0.37
CD28P10747 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC12.71□□□□□ -0.37
CD28P10747 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.71□□□□□ -0.37
CD28P10747 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.71□□□□□ -0.37
CD28P10747 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.71□□□□□ -0.37
CD28P10747 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.71□□□□□ -0.37
CD28P10747 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
CD28P10747 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC12.71□□□□□ -0.37
CD28P10747 AL133215.2-201ENST00000609242 977 ntBASIC12.71□□□□□ -0.37
CD28P10747 AL844908.2-201ENST00000609461 460 ntBASIC12.71□□□□□ -0.37
CD28P10747 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.71□□□□□ -0.37
CD28P10747 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD28P10747 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD28P10747 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CD28P10747 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CD28P10747 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CD28P10747 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD28P10747 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD28P10747 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD28P10747 ACE-204ENST00000428043 5120 ntTSL 2 BASIC12.71□□□□□ -0.38
CD28P10747 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CD28P10747 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
CD28P10747 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.71□□□□□ -0.38
CD28P10747 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD28P10747 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.71□□□□□ -0.38
CD28P10747 GPAA1P2-202ENST00000606848 1787 ntBASIC12.71□□□□□ -0.38
CD28P10747 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC12.71□□□□□ -0.38
CD28P10747 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
CD28P10747 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD28P10747 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD28P10747 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
CD28P10747 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
CD28P10747 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC12.71□□□□□ -0.38
CD28P10747 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
CD28P10747 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC12.7□□□□□ -0.38
CD28P10747 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CD28P10747 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
CD28P10747 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.7□□□□□ -0.38
CD28P10747 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
CD28P10747 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC12.7□□□□□ -0.38
CD28P10747 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CD28P10747 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CD28P10747 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 AL031731.1-201ENST00000642131 2094 ntBASIC12.7□□□□□ -0.38
CD28P10747 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC12.7□□□□□ -0.38
CD28P10747 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CD28P10747 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.7□□□□□ -0.38
CD28P10747 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
CD28P10747 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
CD28P10747 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.7□□□□□ -0.38
CD28P10747 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC12.7□□□□□ -0.38
CD28P10747 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC12.7□□□□□ -0.38
CD28P10747 GAPDHP21-201ENST00000450301 1010 ntBASIC12.7□□□□□ -0.38
CD28P10747 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC12.7□□□□□ -0.38
CD28P10747 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.7□□□□□ -0.38
CD28P10747 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC12.7□□□□□ -0.38
CD28P10747 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.7□□□□□ -0.38
CD28P10747 SPDYE22P-201ENST00000582158 798 ntBASIC12.7□□□□□ -0.38
CD28P10747 AC024267.1-201ENST00000582320 895 ntBASIC12.7□□□□□ -0.38
CD28P10747 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.38
CD28P10747 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.7□□□□□ -0.38
CD28P10747 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms