Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SFTPBP07988 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC14.22□□□□□ -0.13
SFTPBP07988 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.22□□□□□ -0.13
SFTPBP07988 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.22□□□□□ -0.13
SFTPBP07988 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.22□□□□□ -0.13
SFTPBP07988 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.22□□□□□ -0.13
SFTPBP07988 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 AC131009.4-201ENST00000624048 1740 ntBASIC14.22□□□□□ -0.13
SFTPBP07988 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
SFTPBP07988 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.22□□□□□ -0.13
SFTPBP07988 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.22□□□□□ -0.13
SFTPBP07988 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.22□□□□□ -0.13
SFTPBP07988 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.22□□□□□ -0.13
SFTPBP07988 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.22□□□□□ -0.13
SFTPBP07988 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.22□□□□□ -0.13
SFTPBP07988 AL031731.1-201ENST00000642131 2094 ntBASIC14.22□□□□□ -0.13
SFTPBP07988 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.22□□□□□ -0.13
SFTPBP07988 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.22□□□□□ -0.13
SFTPBP07988 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.22□□□□□ -0.13
SFTPBP07988 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.22□□□□□ -0.13
SFTPBP07988 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SFTPBP07988 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC14.22□□□□□ -0.13
SFTPBP07988 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.22□□□□□ -0.13
SFTPBP07988 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
SFTPBP07988 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
SFTPBP07988 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.22□□□□□ -0.13
SFTPBP07988 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SFTPBP07988 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.21□□□□□ -0.13
SFTPBP07988 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.21□□□□□ -0.13
SFTPBP07988 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SFTPBP07988 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 SLC22A20-204ENST00000530038 1673 ntBASIC14.21□□□□□ -0.13
SFTPBP07988 AC023824.1-201ENST00000562945 2975 ntBASIC14.21□□□□□ -0.13
SFTPBP07988 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.21□□□□□ -0.13
SFTPBP07988 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
SFTPBP07988 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.21□□□□□ -0.13
SFTPBP07988 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
SFTPBP07988 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
SFTPBP07988 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.21□□□□□ -0.13
SFTPBP07988 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC14.21□□□□□ -0.13
SFTPBP07988 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC14.21□□□□□ -0.13
SFTPBP07988 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
SFTPBP07988 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
SFTPBP07988 KRT8P39-201ENST00000396270 1433 ntBASIC14.21□□□□□ -0.13
SFTPBP07988 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.21□□□□□ -0.13
SFTPBP07988 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
SFTPBP07988 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SFTPBP07988 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.21□□□□□ -0.14
SFTPBP07988 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.14
SFTPBP07988 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.21□□□□□ -0.14
SFTPBP07988 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
SFTPBP07988 GGT4P-201ENST00000623672 1708 ntBASIC14.21□□□□□ -0.14
SFTPBP07988 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.21□□□□□ -0.14
SFTPBP07988 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
SFTPBP07988 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
SFTPBP07988 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
SFTPBP07988 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC14.21□□□□□ -0.14
SFTPBP07988 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms