Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 AC131009.4-201ENST00000624048 1740 ntBASIC18.3■□□□□ 0.52
TPM3P06753 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
TPM3P06753 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.3■□□□□ 0.52
TPM3P06753 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.3■□□□□ 0.52
TPM3P06753 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TPM3P06753 AP002414.4-201ENST00000589764 1148 ntBASIC18.3■□□□□ 0.52
TPM3P06753 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TPM3P06753 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC18.3■□□□□ 0.52
TPM3P06753 AP002414.2-201ENST00000591780 3365 ntBASIC18.3■□□□□ 0.52
TPM3P06753 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC18.3■□□□□ 0.52
TPM3P06753 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TPM3P06753 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
TPM3P06753 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
TPM3P06753 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
TPM3P06753 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 AC092919.2-201ENST00000623631 1645 ntBASIC18.3■□□□□ 0.52
TPM3P06753 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC18.3■□□□□ 0.52
TPM3P06753 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TPM3P06753 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM3P06753 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM3P06753 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM3P06753 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
TPM3P06753 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM3P06753 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 PCDHA3-202ENST00000532566 4594 ntBASIC18.29■□□□□ 0.52
TPM3P06753 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM3P06753 RCN1P1-201ENST00000400413 996 ntBASIC18.29■□□□□ 0.52
TPM3P06753 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM3P06753 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.29■□□□□ 0.52
TPM3P06753 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.29■□□□□ 0.52
TPM3P06753 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
TPM3P06753 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM3P06753 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
TPM3P06753 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC18.29■□□□□ 0.52
TPM3P06753 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TPM3P06753 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.29■□□□□ 0.52
TPM3P06753 AC005089.1-201ENST00000619486 2241 ntBASIC18.29■□□□□ 0.52
TPM3P06753 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TPM3P06753 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
TPM3P06753 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC18.28■□□□□ 0.52
TPM3P06753 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM3P06753 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM3P06753 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC18.28■□□□□ 0.52
TPM3P06753 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC18.28■□□□□ 0.52
TPM3P06753 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
TPM3P06753 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM3P06753 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TPM3P06753 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TPM3P06753 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TPM3P06753 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM3P06753 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.28■□□□□ 0.52
TPM3P06753 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC18.28■□□□□ 0.52
TPM3P06753 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC18.28■□□□□ 0.52
TPM3P06753 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC18.28■□□□□ 0.52
TPM3P06753 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.28■□□□□ 0.52
TPM3P06753 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.28■□□□□ 0.52
TPM3P06753 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.28■□□□□ 0.52
TPM3P06753 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.28■□□□□ 0.52
TPM3P06753 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.28■□□□□ 0.52
TPM3P06753 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TPM3P06753 AL022326.1-202ENST00000641533 845 ntBASIC18.28■□□□□ 0.52
TPM3P06753 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TPM3P06753 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC18.28■□□□□ 0.52
TPM3P06753 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TPM3P06753 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM3P06753 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM3P06753 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM3P06753 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TPM3P06753 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TPM3P06753 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC18.28■□□□□ 0.52
TPM3P06753 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TPM3P06753 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms