Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 AC009477.1-201ENST00000452936 217 ntBASIC15.26■□□□□ 0.03
PDGFAP04085 HLA-V-204ENST00000476601 1289 ntBASIC15.26■□□□□ 0.03
PDGFAP04085 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.26■□□□□ 0.03
PDGFAP04085 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.26■□□□□ 0.03
PDGFAP04085 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC15.26■□□□□ 0.03
PDGFAP04085 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.26■□□□□ 0.03
PDGFAP04085 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC15.26■□□□□ 0.03
PDGFAP04085 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 CDK4-206ENST00000549606 558 ntTSL 2 BASIC15.26■□□□□ 0.03
PDGFAP04085 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.26■□□□□ 0.03
PDGFAP04085 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.26■□□□□ 0.03
PDGFAP04085 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.26■□□□□ 0.03
PDGFAP04085 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 CYP2A7P1-201ENST00000595391 815 ntBASIC15.26■□□□□ 0.03
PDGFAP04085 AC073389.1-201ENST00000595595 795 ntBASIC15.26■□□□□ 0.03
PDGFAP04085 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
PDGFAP04085 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 F11R-206ENST00000621309 4770 ntTSL 5 BASIC15.26■□□□□ 0.03
PDGFAP04085 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.26■□□□□ 0.03
PDGFAP04085 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.26■□□□□ 0.03
PDGFAP04085 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.26■□□□□ 0.03
PDGFAP04085 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDGFAP04085 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.25■□□□□ 0.03
PDGFAP04085 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.25■□□□□ 0.03
PDGFAP04085 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PDGFAP04085 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC15.25■□□□□ 0.03
PDGFAP04085 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.25■□□□□ 0.03
PDGFAP04085 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PDGFAP04085 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PDGFAP04085 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
PDGFAP04085 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.25■□□□□ 0.03
PDGFAP04085 HLA-V-201ENST00000429037 534 ntBASIC15.25■□□□□ 0.03
PDGFAP04085 U91328.1-201ENST00000437528 223 ntBASIC15.25■□□□□ 0.03
PDGFAP04085 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.25■□□□□ 0.03
PDGFAP04085 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.25■□□□□ 0.03
PDGFAP04085 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.25■□□□□ 0.03
PDGFAP04085 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.25■□□□□ 0.03
PDGFAP04085 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.25■□□□□ 0.03
PDGFAP04085 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.25■□□□□ 0.03
PDGFAP04085 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PDGFAP04085 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.25■□□□□ 0.03
PDGFAP04085 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
PDGFAP04085 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDGFAP04085 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.24■□□□□ 0.03
PDGFAP04085 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PDGFAP04085 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
PDGFAP04085 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.24■□□□□ 0.03
PDGFAP04085 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
PDGFAP04085 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.24■□□□□ 0.03
PDGFAP04085 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
PDGFAP04085 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
PDGFAP04085 ARSEP1-201ENST00000420443 635 ntBASIC15.24■□□□□ 0.03
PDGFAP04085 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC15.24■□□□□ 0.03
PDGFAP04085 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.24■□□□□ 0.03
PDGFAP04085 STOM-203ENST00000538954 1257 ntTSL 5 BASIC15.24■□□□□ 0.03
PDGFAP04085 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.24■□□□□ 0.03
PDGFAP04085 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC15.24■□□□□ 0.03
PDGFAP04085 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
PDGFAP04085 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms