Protein–RNA interactions for Protein: O95025

SEMA3D, Semaphorin-3D, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3DO95025 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SEMA3DO95025 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SEMA3DO95025 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SEMA3DO95025 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SEMA3DO95025 AC022188.1-201ENST00000620960 1664 ntBASIC15.63■□□□□ 0.09
SEMA3DO95025 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SEMA3DO95025 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SEMA3DO95025 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SEMA3DO95025 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SEMA3DO95025 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SEMA3DO95025 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.62■□□□□ 0.09
SEMA3DO95025 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC15.62■□□□□ 0.09
SEMA3DO95025 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SEMA3DO95025 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC15.62■□□□□ 0.09
SEMA3DO95025 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC15.62■□□□□ 0.09
SEMA3DO95025 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SEMA3DO95025 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.62■□□□□ 0.09
SEMA3DO95025 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.62■□□□□ 0.09
SEMA3DO95025 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SEMA3DO95025 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.62■□□□□ 0.09
SEMA3DO95025 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SEMA3DO95025 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SEMA3DO95025 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SEMA3DO95025 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SEMA3DO95025 AL022342.1-201ENST00000400363 863 ntBASIC15.62■□□□□ 0.09
SEMA3DO95025 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.62■□□□□ 0.09
SEMA3DO95025 NMU-202ENST00000505262 693 ntTSL 3 BASIC15.62■□□□□ 0.09
SEMA3DO95025 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.62■□□□□ 0.09
SEMA3DO95025 PRYP6-201ENST00000514804 343 ntBASIC15.62■□□□□ 0.09
SEMA3DO95025 AC002347.1-201ENST00000569543 541 ntBASIC15.62■□□□□ 0.09
SEMA3DO95025 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SEMA3DO95025 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SEMA3DO95025 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC15.62■□□□□ 0.09
SEMA3DO95025 AL365330.1-201ENST00000607459 531 ntBASIC15.62■□□□□ 0.09
SEMA3DO95025 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.62■□□□□ 0.09
SEMA3DO95025 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.62■□□□□ 0.09
SEMA3DO95025 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SEMA3DO95025 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.62■□□□□ 0.09
SEMA3DO95025 AKAP8P1-201ENST00000434743 1349 ntBASIC15.62■□□□□ 0.09
SEMA3DO95025 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
SEMA3DO95025 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SEMA3DO95025 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
SEMA3DO95025 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SEMA3DO95025 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SEMA3DO95025 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SEMA3DO95025 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SEMA3DO95025 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.62■□□□□ 0.09
SEMA3DO95025 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SEMA3DO95025 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SEMA3DO95025 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
SEMA3DO95025 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.61■□□□□ 0.09
SEMA3DO95025 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SEMA3DO95025 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
SEMA3DO95025 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.61■□□□□ 0.09
SEMA3DO95025 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.61■□□□□ 0.09
SEMA3DO95025 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
SEMA3DO95025 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
SEMA3DO95025 AC245100.5-201ENST00000452108 331 ntBASIC15.61■□□□□ 0.09
SEMA3DO95025 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.61■□□□□ 0.09
SEMA3DO95025 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SEMA3DO95025 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.61■□□□□ 0.09
SEMA3DO95025 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
SEMA3DO95025 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.61■□□□□ 0.09
SEMA3DO95025 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.61■□□□□ 0.09
SEMA3DO95025 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.61■□□□□ 0.09
SEMA3DO95025 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
SEMA3DO95025 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.61■□□□□ 0.09
SEMA3DO95025 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SEMA3DO95025 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SEMA3DO95025 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.61■□□□□ 0.09
SEMA3DO95025 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
SEMA3DO95025 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SEMA3DO95025 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.6■□□□□ 0.09
SEMA3DO95025 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SEMA3DO95025 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SEMA3DO95025 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SEMA3DO95025 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.6■□□□□ 0.09
SEMA3DO95025 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SEMA3DO95025 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SEMA3DO95025 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SEMA3DO95025 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms