Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 AC092552.1-201ENST00000547243 906 ntBASIC18.87■□□□□ 0.61
CTNND1O60716 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
CTNND1O60716 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.87■□□□□ 0.61
CTNND1O60716 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.87■□□□□ 0.61
CTNND1O60716 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTNND1O60716 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CTNND1O60716 MIR6799-201ENST00000620297 69 ntBASIC18.87■□□□□ 0.61
CTNND1O60716 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CTNND1O60716 AC005915.1-201ENST00000624912 2018 ntBASIC18.87■□□□□ 0.61
CTNND1O60716 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.87■□□□□ 0.61
CTNND1O60716 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTNND1O60716 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 AL645608.8-201ENST00000606034 2086 ntBASIC18.86■□□□□ 0.61
CTNND1O60716 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC18.86■□□□□ 0.61
CTNND1O60716 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CTNND1O60716 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.86■□□□□ 0.61
CTNND1O60716 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC18.86■□□□□ 0.61
CTNND1O60716 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CTNND1O60716 CLK3P2-201ENST00000427566 1453 ntBASIC18.86■□□□□ 0.61
CTNND1O60716 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.86■□□□□ 0.61
CTNND1O60716 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.86■□□□□ 0.61
CTNND1O60716 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
CTNND1O60716 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC18.86■□□□□ 0.61
CTNND1O60716 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.86■□□□□ 0.61
CTNND1O60716 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.86■□□□□ 0.61
CTNND1O60716 TMEM14DP-201ENST00000422205 345 ntBASIC18.86■□□□□ 0.61
CTNND1O60716 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CTNND1O60716 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.86■□□□□ 0.61
CTNND1O60716 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC18.86■□□□□ 0.61
CTNND1O60716 POU5F1P6-201ENST00000466990 990 ntBASIC18.86■□□□□ 0.61
CTNND1O60716 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.86■□□□□ 0.61
CTNND1O60716 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.86■□□□□ 0.61
CTNND1O60716 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC18.86■□□□□ 0.61
CTNND1O60716 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC18.86■□□□□ 0.61
CTNND1O60716 SPIB-207ENST00000597855 564 ntTSL 4 BASIC18.86■□□□□ 0.61
CTNND1O60716 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.86■□□□□ 0.61
CTNND1O60716 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.86■□□□□ 0.61
CTNND1O60716 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CTNND1O60716 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.86■□□□□ 0.61
CTNND1O60716 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTNND1O60716 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CTNND1O60716 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CTNND1O60716 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.85■□□□□ 0.61
CTNND1O60716 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.85■□□□□ 0.61
CTNND1O60716 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.85■□□□□ 0.61
CTNND1O60716 EEF1DP4-201ENST00000446006 880 ntBASIC18.85■□□□□ 0.61
CTNND1O60716 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CTNND1O60716 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC18.85■□□□□ 0.61
CTNND1O60716 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.85■□□□□ 0.61
CTNND1O60716 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
CTNND1O60716 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CTNND1O60716 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CTNND1O60716 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.85■□□□□ 0.61
CTNND1O60716 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
CTNND1O60716 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTNND1O60716 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
CTNND1O60716 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
CTNND1O60716 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNND1O60716 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNND1O60716 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.84■□□□□ 0.61
CTNND1O60716 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNND1O60716 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
CTNND1O60716 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTNND1O60716 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTNND1O60716 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms