Protein–RNA interactions for Protein: O60547

GMDS, GDP-mannose 4,6 dehydratase, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GMDSO60547 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC14.47□□□□□ -0.09
GMDSO60547 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.47□□□□□ -0.09
GMDSO60547 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.47□□□□□ -0.09
GMDSO60547 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.47□□□□□ -0.09
GMDSO60547 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.47□□□□□ -0.09
GMDSO60547 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GMDSO60547 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GMDSO60547 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GMDSO60547 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
GMDSO60547 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
GMDSO60547 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
GMDSO60547 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
GMDSO60547 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC14.47□□□□□ -0.09
GMDSO60547 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.47□□□□□ -0.09
GMDSO60547 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
GMDSO60547 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
GMDSO60547 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GMDSO60547 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GMDSO60547 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.47□□□□□ -0.09
GMDSO60547 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
GMDSO60547 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
GMDSO60547 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.47□□□□□ -0.09
GMDSO60547 AC002310.6-201ENST00000624451 1377 ntBASIC14.47□□□□□ -0.09
GMDSO60547 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.47□□□□□ -0.09
GMDSO60547 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.47□□□□□ -0.09
GMDSO60547 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
GMDSO60547 AC022532.1-201ENST00000624563 1728 ntBASIC14.46□□□□□ -0.09
GMDSO60547 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
GMDSO60547 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC14.46□□□□□ -0.09
GMDSO60547 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GMDSO60547 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
GMDSO60547 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
GMDSO60547 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
GMDSO60547 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GMDSO60547 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GMDSO60547 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GMDSO60547 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.09
GMDSO60547 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GMDSO60547 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GMDSO60547 MRPL20P1-201ENST00000400819 433 ntBASIC14.46□□□□□ -0.09
GMDSO60547 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GMDSO60547 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.46□□□□□ -0.09
GMDSO60547 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GMDSO60547 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.46□□□□□ -0.09
GMDSO60547 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.46□□□□□ -0.09
GMDSO60547 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.46□□□□□ -0.09
GMDSO60547 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
GMDSO60547 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GMDSO60547 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.46□□□□□ -0.09
GMDSO60547 MIR7706-201ENST00000613747 67 ntBASIC14.46□□□□□ -0.09
GMDSO60547 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GMDSO60547 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GMDSO60547 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
GMDSO60547 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.46□□□□□ -0.09
GMDSO60547 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
GMDSO60547 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GMDSO60547 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
GMDSO60547 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
GMDSO60547 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.46□□□□□ -0.1
GMDSO60547 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
GMDSO60547 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
GMDSO60547 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
GMDSO60547 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GMDSO60547 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.46□□□□□ -0.1
GMDSO60547 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GMDSO60547 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
GMDSO60547 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
GMDSO60547 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
GMDSO60547 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.45□□□□□ -0.1
GMDSO60547 HLA-A-201ENST00000376802 1334 ntBASIC14.45□□□□□ -0.1
GMDSO60547 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
GMDSO60547 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.45□□□□□ -0.1
GMDSO60547 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
GMDSO60547 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.45□□□□□ -0.1
GMDSO60547 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
GMDSO60547 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.45□□□□□ -0.1
GMDSO60547 CICP4-201ENST00000447359 2812 ntBASIC14.45□□□□□ -0.1
GMDSO60547 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
GMDSO60547 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.45□□□□□ -0.1
GMDSO60547 CENPM-204ENST00000402420 688 ntTSL 5 BASIC14.45□□□□□ -0.1
GMDSO60547 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC14.45□□□□□ -0.1
GMDSO60547 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
GMDSO60547 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
GMDSO60547 AC009078.2-202ENST00000463353 338 ntBASIC14.45□□□□□ -0.1
GMDSO60547 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms