Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 DUX4L27-201ENST00000554796 1261 ntBASIC15.58■□□□□ 0.08
PRICKLE3O43900 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.58■□□□□ 0.08
PRICKLE3O43900 AC092364.2-202ENST00000597012 1073 ntBASIC15.58■□□□□ 0.08
PRICKLE3O43900 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.58■□□□□ 0.08
PRICKLE3O43900 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PRICKLE3O43900 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.58■□□□□ 0.08
PRICKLE3O43900 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRICKLE3O43900 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
PRICKLE3O43900 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PRICKLE3O43900 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.58■□□□□ 0.08
PRICKLE3O43900 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.58■□□□□ 0.08
PRICKLE3O43900 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.58■□□□□ 0.08
PRICKLE3O43900 AL691432.1-201ENST00000596308 1422 ntBASIC15.58■□□□□ 0.08
PRICKLE3O43900 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRICKLE3O43900 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRICKLE3O43900 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PRICKLE3O43900 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.58■□□□□ 0.08
PRICKLE3O43900 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 MIR648-201ENST00000385046 94 ntBASIC15.57■□□□□ 0.08
PRICKLE3O43900 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 AC107890.1-201ENST00000422478 521 ntBASIC15.57■□□□□ 0.08
PRICKLE3O43900 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
PRICKLE3O43900 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PRICKLE3O43900 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.56■□□□□ 0.08
PRICKLE3O43900 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.56■□□□□ 0.08
PRICKLE3O43900 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
PRICKLE3O43900 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PRICKLE3O43900 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
PRICKLE3O43900 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.56■□□□□ 0.08
PRICKLE3O43900 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.56■□□□□ 0.08
PRICKLE3O43900 SPDYE17-201ENST00000412399 783 ntBASIC15.56■□□□□ 0.08
PRICKLE3O43900 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 AC125807.1-201ENST00000483097 614 ntBASIC15.56■□□□□ 0.08
PRICKLE3O43900 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.56■□□□□ 0.08
PRICKLE3O43900 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.56■□□□□ 0.08
PRICKLE3O43900 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC15.56■□□□□ 0.08
PRICKLE3O43900 AC026979.3-201ENST00000607315 403 ntBASIC15.56■□□□□ 0.08
PRICKLE3O43900 AC106028.4-201ENST00000614509 607 ntBASIC15.56■□□□□ 0.08
PRICKLE3O43900 AC093512.1-201ENST00000617969 520 ntBASIC15.56■□□□□ 0.08
PRICKLE3O43900 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.56■□□□□ 0.08
PRICKLE3O43900 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.56■□□□□ 0.08
PRICKLE3O43900 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.56■□□□□ 0.08
PRICKLE3O43900 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PRICKLE3O43900 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.56■□□□□ 0.08
PRICKLE3O43900 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.56■□□□□ 0.08
PRICKLE3O43900 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms