Protein–RNA interactions for Protein: O43739

CYTH3, Cytohesin-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3O43739 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYTH3O43739 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYTH3O43739 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYTH3O43739 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CYTH3O43739 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.59■□□□□ 0.57
CYTH3O43739 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.59■□□□□ 0.57
CYTH3O43739 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CYTH3O43739 MIR648-201ENST00000385046 94 ntBASIC18.59■□□□□ 0.57
CYTH3O43739 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.59■□□□□ 0.57
CYTH3O43739 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.59■□□□□ 0.57
CYTH3O43739 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CYTH3O43739 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.59■□□□□ 0.57
CYTH3O43739 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.59■□□□□ 0.57
CYTH3O43739 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.59■□□□□ 0.57
CYTH3O43739 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CYTH3O43739 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.59■□□□□ 0.57
CYTH3O43739 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
CYTH3O43739 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC18.59■□□□□ 0.57
CYTH3O43739 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYTH3O43739 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYTH3O43739 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYTH3O43739 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYTH3O43739 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CYTH3O43739 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYTH3O43739 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CYTH3O43739 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
CYTH3O43739 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC18.59■□□□□ 0.57
CYTH3O43739 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC18.59■□□□□ 0.57
CYTH3O43739 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC18.59■□□□□ 0.57
CYTH3O43739 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
CYTH3O43739 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CYTH3O43739 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CYTH3O43739 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CYTH3O43739 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CYTH3O43739 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CYTH3O43739 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.58■□□□□ 0.57
CYTH3O43739 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
CYTH3O43739 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CYTH3O43739 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYTH3O43739 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYTH3O43739 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYTH3O43739 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYTH3O43739 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CYTH3O43739 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CYTH3O43739 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYTH3O43739 RAC2-204ENST00000406508 893 ntTSL 5 BASIC18.58■□□□□ 0.56
CYTH3O43739 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.58■□□□□ 0.56
CYTH3O43739 RNA5SP421-201ENST00000516864 134 ntBASIC18.58■□□□□ 0.56
CYTH3O43739 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.58■□□□□ 0.56
CYTH3O43739 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CYTH3O43739 AC243562.2-201ENST00000561247 970 ntBASIC18.58■□□□□ 0.56
CYTH3O43739 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.58■□□□□ 0.56
CYTH3O43739 AC011467.4-201ENST00000594891 528 ntBASIC18.58■□□□□ 0.56
CYTH3O43739 AJ011932.1-201ENST00000621707 465 ntBASIC18.58■□□□□ 0.56
CYTH3O43739 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYTH3O43739 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CYTH3O43739 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYTH3O43739 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.58■□□□□ 0.56
CYTH3O43739 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYTH3O43739 ZBTB45P2-201ENST00000452245 1531 ntBASIC18.58■□□□□ 0.56
CYTH3O43739 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYTH3O43739 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYTH3O43739 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
CYTH3O43739 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CYTH3O43739 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CYTH3O43739 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC18.57■□□□□ 0.56
CYTH3O43739 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYTH3O43739 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CYTH3O43739 BANP-204ENST00000393208 2283 ntTSL 2 BASIC18.57■□□□□ 0.56
CYTH3O43739 AC024909.3-201ENST00000611513 2257 ntBASIC18.57■□□□□ 0.56
CYTH3O43739 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYTH3O43739 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC18.57■□□□□ 0.56
CYTH3O43739 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYTH3O43739 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
CYTH3O43739 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYTH3O43739 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CYTH3O43739 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYTH3O43739 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYTH3O43739 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CYTH3O43739 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CYTH3O43739 INGX-202ENST00000489074 768 ntBASIC18.57■□□□□ 0.56
CYTH3O43739 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC18.57■□□□□ 0.56
CYTH3O43739 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.57■□□□□ 0.56
CYTH3O43739 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.57■□□□□ 0.56
CYTH3O43739 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CYTH3O43739 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CYTH3O43739 AL603832.2-201ENST00000566195 2125 ntBASIC18.57■□□□□ 0.56
CYTH3O43739 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC18.57■□□□□ 0.56
CYTH3O43739 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC18.57■□□□□ 0.56
CYTH3O43739 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CYTH3O43739 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.57■□□□□ 0.56
CYTH3O43739 AL033527.5-202ENST00000641632 1098 ntBASIC18.57■□□□□ 0.56
CYTH3O43739 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CYTH3O43739 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYTH3O43739 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYTH3O43739 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CYTH3O43739 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYTH3O43739 AP001282.1-201ENST00000531301 1499 ntBASIC18.57■□□□□ 0.56
CYTH3O43739 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CYTH3O43739 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms