Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HOXA2O43364 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXA2O43364 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HOXA2O43364 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXA2O43364 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.24■□□□□ 0.35
HOXA2O43364 KRT43P-201ENST00000434019 910 ntBASIC17.24■□□□□ 0.35
HOXA2O43364 AL162726.2-201ENST00000438986 1017 ntBASIC17.24■□□□□ 0.35
HOXA2O43364 RPL13P2-201ENST00000440687 659 ntBASIC17.24■□□□□ 0.35
HOXA2O43364 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 AC022210.1-201ENST00000449856 793 ntBASIC17.24■□□□□ 0.35
HOXA2O43364 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXA2O43364 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.24■□□□□ 0.35
HOXA2O43364 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXA2O43364 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXA2O43364 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.24■□□□□ 0.35
HOXA2O43364 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.24■□□□□ 0.35
HOXA2O43364 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXA2O43364 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HOXA2O43364 AL512343.1-201ENST00000605837 169 ntBASIC17.24■□□□□ 0.35
HOXA2O43364 LINC01115-203ENST00000606068 577 ntBASIC17.24■□□□□ 0.35
HOXA2O43364 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.24■□□□□ 0.35
HOXA2O43364 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC17.24■□□□□ 0.35
HOXA2O43364 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.24■□□□□ 0.35
HOXA2O43364 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.24■□□□□ 0.35
HOXA2O43364 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HOXA2O43364 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.24■□□□□ 0.35
HOXA2O43364 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
HOXA2O43364 CDC14C-201ENST00000428251 1719 ntBASIC17.24■□□□□ 0.35
HOXA2O43364 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.24■□□□□ 0.35
HOXA2O43364 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXA2O43364 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXA2O43364 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXA2O43364 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXA2O43364 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXA2O43364 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXA2O43364 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXA2O43364 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXA2O43364 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXA2O43364 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXA2O43364 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXA2O43364 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXA2O43364 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXA2O43364 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
HOXA2O43364 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXA2O43364 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXA2O43364 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXA2O43364 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXA2O43364 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HOXA2O43364 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXA2O43364 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.23■□□□□ 0.35
HOXA2O43364 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HOXA2O43364 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HOXA2O43364 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HOXA2O43364 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXA2O43364 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.23■□□□□ 0.35
HOXA2O43364 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.23■□□□□ 0.35
HOXA2O43364 AP005482.1-201ENST00000563722 1273 ntBASIC17.23■□□□□ 0.35
HOXA2O43364 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXA2O43364 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.23■□□□□ 0.35
HOXA2O43364 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXA2O43364 AL391069.4-201ENST00000609583 481 ntBASIC17.23■□□□□ 0.35
HOXA2O43364 AL158212.4-201ENST00000624062 1286 ntBASIC17.23■□□□□ 0.35
HOXA2O43364 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.23■□□□□ 0.35
HOXA2O43364 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.23■□□□□ 0.35
HOXA2O43364 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
HOXA2O43364 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXA2O43364 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HOXA2O43364 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HOXA2O43364 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HOXA2O43364 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
HOXA2O43364 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
HOXA2O43364 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
HOXA2O43364 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HOXA2O43364 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXA2O43364 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.22■□□□□ 0.35
HOXA2O43364 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXA2O43364 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
HOXA2O43364 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC17.22■□□□□ 0.35
HOXA2O43364 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXA2O43364 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXA2O43364 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXA2O43364 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HOXA2O43364 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HOXA2O43364 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
HOXA2O43364 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
HOXA2O43364 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms