Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.13□□□□□ -0.15
PHF1O43189 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.13□□□□□ -0.15
PHF1O43189 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.13□□□□□ -0.15
PHF1O43189 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.13□□□□□ -0.15
PHF1O43189 AL513480.1-201ENST00000451731 511 ntBASIC14.13□□□□□ -0.15
PHF1O43189 INGX-202ENST00000489074 768 ntBASIC14.13□□□□□ -0.15
PHF1O43189 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.13□□□□□ -0.15
PHF1O43189 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
PHF1O43189 KRT19P2-202ENST00000557173 1012 ntBASIC14.13□□□□□ -0.15
PHF1O43189 AC087641.1-201ENST00000557561 1021 ntBASIC14.13□□□□□ -0.15
PHF1O43189 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.13□□□□□ -0.15
PHF1O43189 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.13□□□□□ -0.15
PHF1O43189 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
PHF1O43189 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 FRMD8P1-201ENST00000440433 1524 ntBASIC14.13□□□□□ -0.15
PHF1O43189 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.13□□□□□ -0.15
PHF1O43189 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PHF1O43189 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
PHF1O43189 LINC00554-201ENST00000564841 3011 ntBASIC14.13□□□□□ -0.15
PHF1O43189 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
PHF1O43189 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.13□□□□□ -0.15
PHF1O43189 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.13□□□□□ -0.15
PHF1O43189 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
PHF1O43189 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.13□□□□□ -0.15
PHF1O43189 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.13□□□□□ -0.15
PHF1O43189 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
PHF1O43189 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.12□□□□□ -0.15
PHF1O43189 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.12□□□□□ -0.15
PHF1O43189 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.12□□□□□ -0.15
PHF1O43189 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC14.12□□□□□ -0.15
PHF1O43189 AC004461.1-201ENST00000412461 403 ntBASIC14.12□□□□□ -0.15
PHF1O43189 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.12□□□□□ -0.15
PHF1O43189 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.12□□□□□ -0.15
PHF1O43189 TERF1P3-201ENST00000505638 1227 ntBASIC14.12□□□□□ -0.15
PHF1O43189 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
PHF1O43189 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.12□□□□□ -0.15
PHF1O43189 AC109322.1-201ENST00000524499 1264 ntBASIC14.12□□□□□ -0.15
PHF1O43189 POLD4-211ENST00000539074 714 ntTSL 3 BASIC14.12□□□□□ -0.15
PHF1O43189 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.12□□□□□ -0.15
PHF1O43189 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.12□□□□□ -0.15
PHF1O43189 DUX4L17-201ENST00000557360 1267 ntBASIC14.12□□□□□ -0.15
PHF1O43189 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.12□□□□□ -0.15
PHF1O43189 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.12□□□□□ -0.15
PHF1O43189 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.12□□□□□ -0.15
PHF1O43189 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC14.12□□□□□ -0.15
PHF1O43189 AC023141.13-201ENST00000604991 943 ntBASIC14.12□□□□□ -0.15
PHF1O43189 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.12□□□□□ -0.15
PHF1O43189 CITED2-204ENST00000618718 901 ntTSL 2 BASIC14.12□□□□□ -0.15
PHF1O43189 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.12□□□□□ -0.15
PHF1O43189 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.12□□□□□ -0.15
PHF1O43189 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.12□□□□□ -0.15
PHF1O43189 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC14.12□□□□□ -0.15
PHF1O43189 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC14.12□□□□□ -0.15
PHF1O43189 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PHF1O43189 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.11□□□□□ -0.15
PHF1O43189 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
PHF1O43189 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PHF1O43189 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PHF1O43189 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.11□□□□□ -0.15
PHF1O43189 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.11□□□□□ -0.15
PHF1O43189 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PHF1O43189 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 MIR600HG-201ENST00000449175 5984 ntBASIC14.11□□□□□ -0.15
PHF1O43189 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PHF1O43189 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms