Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC25.6■■□□□ 1.69
CHD1O14646 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC25.59■■□□□ 1.69
CHD1O14646 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
CHD1O14646 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHD1O14646 AL008707.1-201ENST00000422498 534 ntBASIC25.59■■□□□ 1.69
CHD1O14646 Z97180.1-201ENST00000445173 988 ntBASIC25.59■■□□□ 1.69
CHD1O14646 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CHD1O14646 PGAM1P5-201ENST00000548011 764 ntBASIC25.59■■□□□ 1.69
CHD1O14646 RN7SL713P-201ENST00000582127 302 ntBASIC25.59■■□□□ 1.69
CHD1O14646 AC097359.3-201ENST00000603982 1210 ntBASIC25.59■■□□□ 1.69
CHD1O14646 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC25.59■■□□□ 1.69
CHD1O14646 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC25.59■■□□□ 1.69
CHD1O14646 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CHD1O14646 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC25.59■■□□□ 1.69
CHD1O14646 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHD1O14646 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC25.58■■□□□ 1.69
CHD1O14646 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHD1O14646 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CHD1O14646 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CHD1O14646 CROCCP2-202ENST00000412962 2773 ntBASIC25.58■■□□□ 1.69
CHD1O14646 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CHD1O14646 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHD1O14646 AL133267.1-201ENST00000398220 340 ntBASIC25.58■■□□□ 1.69
CHD1O14646 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC25.58■■□□□ 1.69
CHD1O14646 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC25.58■■□□□ 1.69
CHD1O14646 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
CHD1O14646 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC25.58■■□□□ 1.69
CHD1O14646 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC25.58■■□□□ 1.69
CHD1O14646 AC061992.1-201ENST00000592569 777 ntTSL 3 BASIC25.58■■□□□ 1.69
CHD1O14646 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CHD1O14646 AC244157.2-201ENST00000616239 1006 ntBASIC25.58■■□□□ 1.69
CHD1O14646 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC25.58■■□□□ 1.69
CHD1O14646 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC25.58■■□□□ 1.69
CHD1O14646 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CHD1O14646 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC25.58■■□□□ 1.69
CHD1O14646 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
CHD1O14646 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
CHD1O14646 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHD1O14646 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHD1O14646 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHD1O14646 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC25.57■■□□□ 1.68
CHD1O14646 HIST2H2BB-201ENST00000449108 381 ntBASIC25.57■■□□□ 1.68
CHD1O14646 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC25.57■■□□□ 1.68
CHD1O14646 AC019193.1-201ENST00000506678 823 ntBASIC25.57■■□□□ 1.68
CHD1O14646 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC25.57■■□□□ 1.68
CHD1O14646 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHD1O14646 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC25.57■■□□□ 1.68
CHD1O14646 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC25.57■■□□□ 1.68
CHD1O14646 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHD1O14646 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHD1O14646 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHD1O14646 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
CHD1O14646 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC25.57■■□□□ 1.68
CHD1O14646 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHD1O14646 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CHD1O14646 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC25.57■■□□□ 1.68
CHD1O14646 SLC16A6P1-201ENST00000413214 1059 ntBASIC25.57■■□□□ 1.68
CHD1O14646 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC25.57■■□□□ 1.68
CHD1O14646 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC25.57■■□□□ 1.68
CHD1O14646 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC25.57■■□□□ 1.68
CHD1O14646 AP001002.3-201ENST00000623482 206 ntBASIC25.57■■□□□ 1.68
CHD1O14646 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
CHD1O14646 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHD1O14646 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
CHD1O14646 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC25.56■■□□□ 1.68
CHD1O14646 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC25.56■■□□□ 1.68
CHD1O14646 AC012618.1-201ENST00000461223 412 ntBASIC25.56■■□□□ 1.68
CHD1O14646 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC25.56■■□□□ 1.68
CHD1O14646 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
CHD1O14646 AC141586.1-203ENST00000567242 366 ntBASIC25.56■■□□□ 1.68
CHD1O14646 AP001065.2-201ENST00000617205 644 ntBASIC25.56■■□□□ 1.68
CHD1O14646 AC100757.4-201ENST00000626934 759 ntBASIC25.56■■□□□ 1.68
CHD1O14646 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC25.56■■□□□ 1.68
CHD1O14646 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC25.56■■□□□ 1.68
CHD1O14646 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CHD1O14646 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
CHD1O14646 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC25.55■■□□□ 1.68
CHD1O14646 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC25.55■■□□□ 1.68
CHD1O14646 BX323043.1-201ENST00000641006 1765 ntBASIC25.55■■□□□ 1.68
CHD1O14646 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CHD1O14646 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC25.55■■□□□ 1.68
CHD1O14646 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHD1O14646 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHD1O14646 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHD1O14646 GHSR-202ENST00000427970 912 ntBASIC25.55■■□□□ 1.68
CHD1O14646 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC25.55■■□□□ 1.68
CHD1O14646 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHD1O14646 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC25.55■■□□□ 1.68
CHD1O14646 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC25.55■■□□□ 1.68
CHD1O14646 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHD1O14646 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CHD1O14646 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHD1O14646 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC25.55■■□□□ 1.68
CHD1O14646 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
CHD1O14646 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHD1O14646 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
CHD1O14646 AL603756.1-201ENST00000606511 2163 ntBASIC25.55■■□□□ 1.68
CHD1O14646 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHD1O14646 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CHD1O14646 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 62.4 ms