Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.46■□□□□ 0.23
AP3B1O00203 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
AP3B1O00203 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.46■□□□□ 0.23
AP3B1O00203 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.46■□□□□ 0.23
AP3B1O00203 AC018845.2-201ENST00000568326 409 ntBASIC16.46■□□□□ 0.23
AP3B1O00203 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3B1O00203 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
AP3B1O00203 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.46■□□□□ 0.23
AP3B1O00203 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3B1O00203 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
AP3B1O00203 BX640515.1-201ENST00000617215 977 ntBASIC16.46■□□□□ 0.23
AP3B1O00203 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
AP3B1O00203 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
AP3B1O00203 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.46■□□□□ 0.23
AP3B1O00203 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.46■□□□□ 0.23
AP3B1O00203 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.46■□□□□ 0.23
AP3B1O00203 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3B1O00203 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
AP3B1O00203 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
AP3B1O00203 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
AP3B1O00203 AC105917.1-201ENST00000506637 2539 ntBASIC16.46■□□□□ 0.22
AP3B1O00203 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
AP3B1O00203 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
AP3B1O00203 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.46■□□□□ 0.22
AP3B1O00203 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
AP3B1O00203 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.45■□□□□ 0.22
AP3B1O00203 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
AP3B1O00203 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
AP3B1O00203 AC011477.6-201ENST00000604980 1927 ntBASIC16.45■□□□□ 0.22
AP3B1O00203 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
AP3B1O00203 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
AP3B1O00203 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
AP3B1O00203 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
AP3B1O00203 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC16.45■□□□□ 0.22
AP3B1O00203 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.45■□□□□ 0.22
AP3B1O00203 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3B1O00203 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.45■□□□□ 0.22
AP3B1O00203 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.45■□□□□ 0.22
AP3B1O00203 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.45■□□□□ 0.22
AP3B1O00203 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.45■□□□□ 0.22
AP3B1O00203 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 AC024267.1-201ENST00000582320 895 ntBASIC16.45■□□□□ 0.22
AP3B1O00203 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3B1O00203 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
AP3B1O00203 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.45■□□□□ 0.22
AP3B1O00203 AC027601.4-201ENST00000611259 610 ntBASIC16.45■□□□□ 0.22
AP3B1O00203 FAM197Y3-203ENST00000618346 717 ntBASIC16.45■□□□□ 0.22
AP3B1O00203 AP001282.1-201ENST00000531301 1499 ntBASIC16.45■□□□□ 0.22
AP3B1O00203 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 AC010491.1-201ENST00000563101 2797 ntBASIC16.45■□□□□ 0.22
AP3B1O00203 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3B1O00203 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.45■□□□□ 0.22
AP3B1O00203 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
AP3B1O00203 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3B1O00203 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.45■□□□□ 0.22
AP3B1O00203 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3B1O00203 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC16.45■□□□□ 0.22
AP3B1O00203 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
AP3B1O00203 AKAP8P1-201ENST00000434743 1349 ntBASIC16.45■□□□□ 0.22
AP3B1O00203 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3B1O00203 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3B1O00203 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3B1O00203 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.44■□□□□ 0.22
AP3B1O00203 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
AP3B1O00203 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3B1O00203 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
AP3B1O00203 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3B1O00203 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.44■□□□□ 0.22
AP3B1O00203 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP3B1O00203 AL590627.1-203ENST00000421194 1026 ntBASIC16.44■□□□□ 0.22
AP3B1O00203 AC007967.2-201ENST00000432613 625 ntBASIC16.44■□□□□ 0.22
AP3B1O00203 KRT18P2-201ENST00000447938 1258 ntBASIC16.44■□□□□ 0.22
AP3B1O00203 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.44■□□□□ 0.22
AP3B1O00203 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.44■□□□□ 0.22
AP3B1O00203 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3B1O00203 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.44■□□□□ 0.22
AP3B1O00203 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.44■□□□□ 0.22
AP3B1O00203 AP002472.1-201ENST00000577490 586 ntBASIC16.44■□□□□ 0.22
AP3B1O00203 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.44■□□□□ 0.22
AP3B1O00203 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.44■□□□□ 0.22
AP3B1O00203 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
AP3B1O00203 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP3B1O00203 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP3B1O00203 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP3B1O00203 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
AP3B1O00203 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms