Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 BNIP3P1-202ENST00000550043 1585 ntBASIC18.69■□□□□ 0.58
PALM3A6NDB9 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 HIST3H2BA-201ENST00000436555 524 ntBASIC18.69■□□□□ 0.58
PALM3A6NDB9 BCRP1-201ENST00000444246 691 ntBASIC18.69■□□□□ 0.58
PALM3A6NDB9 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 RNA5SP421-201ENST00000516864 134 ntBASIC18.69■□□□□ 0.58
PALM3A6NDB9 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 AC243562.2-201ENST00000561247 970 ntBASIC18.69■□□□□ 0.58
PALM3A6NDB9 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 AL844908.2-201ENST00000609461 460 ntBASIC18.69■□□□□ 0.58
PALM3A6NDB9 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 AC087499.5-201ENST00000452760 1342 ntBASIC18.69■□□□□ 0.58
PALM3A6NDB9 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.69■□□□□ 0.58
PALM3A6NDB9 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PALM3A6NDB9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.69■□□□□ 0.58
PALM3A6NDB9 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PALM3A6NDB9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PALM3A6NDB9 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.68■□□□□ 0.58
PALM3A6NDB9 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
PALM3A6NDB9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC18.68■□□□□ 0.58
PALM3A6NDB9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PALM3A6NDB9 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PALM3A6NDB9 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PALM3A6NDB9 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PALM3A6NDB9 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PALM3A6NDB9 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PALM3A6NDB9 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.68■□□□□ 0.58
PALM3A6NDB9 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PALM3A6NDB9 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PALM3A6NDB9 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC18.68■□□□□ 0.58
PALM3A6NDB9 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PALM3A6NDB9 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.68■□□□□ 0.58
PALM3A6NDB9 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.68■□□□□ 0.58
PALM3A6NDB9 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
PALM3A6NDB9 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
PALM3A6NDB9 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.68■□□□□ 0.58
PALM3A6NDB9 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.68■□□□□ 0.58
PALM3A6NDB9 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PALM3A6NDB9 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC18.68■□□□□ 0.58
PALM3A6NDB9 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PALM3A6NDB9 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PALM3A6NDB9 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.67■□□□□ 0.58
PALM3A6NDB9 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PALM3A6NDB9 AP001282.1-201ENST00000531301 1499 ntBASIC18.67■□□□□ 0.58
PALM3A6NDB9 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PALM3A6NDB9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PALM3A6NDB9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PALM3A6NDB9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PALM3A6NDB9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PALM3A6NDB9 MRPS18AP1-201ENST00000414458 589 ntBASIC18.67■□□□□ 0.58
PALM3A6NDB9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.67■□□□□ 0.58
PALM3A6NDB9 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC18.67■□□□□ 0.58
PALM3A6NDB9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC18.67■□□□□ 0.58
PALM3A6NDB9 AC009477.1-201ENST00000452936 217 ntBASIC18.67■□□□□ 0.58
PALM3A6NDB9 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.67■□□□□ 0.58
PALM3A6NDB9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.67■□□□□ 0.58
PALM3A6NDB9 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PALM3A6NDB9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PALM3A6NDB9 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PALM3A6NDB9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
PALM3A6NDB9 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PALM3A6NDB9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PALM3A6NDB9 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.67■□□□□ 0.58
PALM3A6NDB9 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PALM3A6NDB9 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.67■□□□□ 0.58
PALM3A6NDB9 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.67■□□□□ 0.58
PALM3A6NDB9 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PALM3A6NDB9 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.67■□□□□ 0.58
PALM3A6NDB9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PALM3A6NDB9 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.67■□□□□ 0.58
PALM3A6NDB9 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.67■□□□□ 0.58
PALM3A6NDB9 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.67■□□□□ 0.58
PALM3A6NDB9 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.66■□□□□ 0.58
PALM3A6NDB9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PALM3A6NDB9 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PALM3A6NDB9 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PALM3A6NDB9 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PALM3A6NDB9 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PALM3A6NDB9 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
PALM3A6NDB9 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PALM3A6NDB9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms