Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 HTR5BP-201ENST00000430851 1154 ntBASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 FAM86C2P-203ENST00000528684 1004 ntBASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC162PA2VCL2 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 AC099063.4-201ENST00000641099 1602 ntBASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 MIR648-201ENST00000385046 94 ntBASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 KRT8P48-201ENST00000515599 1220 ntBASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 AC243562.1-201ENST00000560672 389 ntBASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 AC027307.2-201ENST00000591252 911 ntBASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 AC073389.1-201ENST00000595595 795 ntBASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 FOXO1B-201ENST00000504678 1527 ntBASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC162PA2VCL2 AC022188.1-201ENST00000620960 1664 ntBASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 AC026120.1-201ENST00000611536 926 ntBASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC162PA2VCL2 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 CDC14C-201ENST00000428251 1719 ntBASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC162PA2VCL2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms