Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRBV5-3A0A0A0MS03 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 AL031284.1-201ENST00000419297 478 ntBASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 AL773604.1-201ENST00000617417 272 ntBASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 AC092127.1-201ENST00000567093 3455 ntBASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.19■□□□□ 0.02
TRBV5-3A0A0A0MS03 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 AC009090.5-201ENST00000624886 2285 ntBASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 IGHV3-22-201ENST00000520721 359 ntBASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 AC116407.3-201ENST00000623905 1129 ntBASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRBV5-3A0A0A0MS03 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRBV5-3A0A0A0MS03 PMS2P7-201ENST00000506558 1336 ntBASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms