Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AC107373.2-201ENST00000607735 490 ntBASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SHANK2Q9UPX8 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 ELK2AP-201ENST00000392510 1007 ntBASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 C1QBPP1-201ENST00000400117 770 ntBASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 AC134915.1-201ENST00000426461 574 ntBASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 AC012441.1-201ENST00000446669 685 ntBASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 KRT90P-201ENST00000549264 1064 ntBASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SHANK2Q9UPX8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 CYP2AB1P-202ENST00000454440 1456 ntBASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 AC106760.1-201ENST00000508690 800 ntBASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 AP001889.1-201ENST00000525414 633 ntBASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 TDH-203ENST00000531764 1110 ntBASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 ENPP7P5-201ENST00000541031 1031 ntBASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 APRT-204ENST00000563655 709 ntTSL 5 BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 AC244093.1-201ENST00000610837 814 ntBASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 AGER-206ENST00000375070 1463 ntTSL 5 BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC23.72■■□□□ 1.39
SHANK2Q9UPX8 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 AC022211.2-201ENST00000585075 2527 ntBASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 AC099336.1-201ENST00000417053 1171 ntBASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 AC026410.3-201ENST00000514280 936 ntBASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 ARL16-210ENST00000574938 751 ntTSL 2 BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 RN7SL219P-201ENST00000582872 296 ntBASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 TECR-220ENST00000600083 1204 ntTSL 2 BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC23.71■■□□□ 1.39
SHANK2Q9UPX8 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms