Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 LINC01115-203ENST00000606068 577 ntBASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC18.54■□□□□ 0.56
SYNPO2Q9UMS6 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 AC134407.2-201ENST00000625089 1978 ntBASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 AC011495.1-201ENST00000498085 584 ntBASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 AC123567.1-201ENST00000548294 1261 ntBASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SYNPO2Q9UMS6 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 MYCLP2-201ENST00000449268 967 ntBASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 SLED1-202ENST00000512051 380 ntBASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 AC097359.3-201ENST00000603982 1210 ntBASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 AL158212.4-201ENST00000624062 1286 ntBASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SYNPO2Q9UMS6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms