Protein–RNA interactions for Protein: Q9UKZ1

CNOT11, CCR4-NOT transcription complex subunit 11, humanhuman

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT11Q9UKZ1 AC138035.3-201ENST00000622706 2791 ntBASIC15.69■□□□□ 0.1
CNOT11Q9UKZ1 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CNOT11Q9UKZ1 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 HCG4B-203ENST00000450128 991 ntBASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 PGAM5P1-201ENST00000518923 814 ntBASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 PMS2P7-201ENST00000506558 1336 ntBASIC15.68■□□□□ 0.1
CNOT11Q9UKZ1 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 RNA5SP416-201ENST00000516838 111 ntBASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
CNOT11Q9UKZ1 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
CNOT11Q9UKZ1 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT11Q9UKZ1 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT11Q9UKZ1 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT11Q9UKZ1 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC15.66■□□□□ 0.1
CNOT11Q9UKZ1 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.66■□□□□ 0.1
CNOT11Q9UKZ1 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT11Q9UKZ1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
CNOT11Q9UKZ1 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms