Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 WDR53-204ENST00000433160 887 ntTSL 5 BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 AP005018.1-201ENST00000525475 301 ntBASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
HDAC6Q9UBN7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
HDAC6Q9UBN7 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.39■□□□□ 0.54
HDAC6Q9UBN7 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
HDAC6Q9UBN7 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
HDAC6Q9UBN7 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 HLA-H-201ENST00000383620 1096 ntBASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 CRB3P1-201ENST00000449338 276 ntBASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 TUBB8P12-201ENST00000308911 1335 ntBASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 TUBB7P-202ENST00000428444 1305 ntBASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 TUBB8P7-204ENST00000567960 1332 ntBASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
HDAC6Q9UBN7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 AC006277.1-201ENST00000624348 1610 ntBASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 AC073439.1-201ENST00000624121 1774 ntBASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 PAUPAR-201ENST00000630360 2965 ntBASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 AC022144.1-201ENST00000602255 1580 ntBASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.38■□□□□ 0.53
HDAC6Q9UBN7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
HDAC6Q9UBN7 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms