Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRMT13Q9NUP7 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRMT13Q9NUP7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRMT13Q9NUP7 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.7■□□□□ 0.42
TRMT13Q9NUP7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.7■□□□□ 0.42
TRMT13Q9NUP7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
TRMT13Q9NUP7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRMT13Q9NUP7 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.7■□□□□ 0.42
TRMT13Q9NUP7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
TRMT13Q9NUP7 AC093525.8-201ENST00000624099 1342 ntBASIC17.7■□□□□ 0.42
TRMT13Q9NUP7 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
TRMT13Q9NUP7 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRMT13Q9NUP7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRMT13Q9NUP7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
TRMT13Q9NUP7 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 CU634019.7-201ENST00000624153 1185 ntBASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 FP236241.2-201ENST00000624906 1185 ntBASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 KRT8P22-201ENST00000562317 1415 ntBASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
TRMT13Q9NUP7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 RPL13P2-201ENST00000440687 659 ntBASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 MIR5189-201ENST00000577370 114 ntBASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 AL691432.1-201ENST00000596308 1422 ntBASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
TRMT13Q9NUP7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 PCDHB18P-201ENST00000524813 2368 ntBASIC17.67■□□□□ 0.42
TRMT13Q9NUP7 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms