Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 AC020658.6-201ENST00000623564 1870 ntBASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 RPSAP43-201ENST00000402237 625 ntBASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 FGFR3P6-201ENST00000457012 610 ntBASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 MIR3687-2-201ENST00000577708 61 ntBASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 MIR3687-1-201ENST00000614492 61 ntBASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 FAM197Y3-203ENST00000618346 717 ntBASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 AC136621.1-201ENST00000624017 2304 ntBASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CCM2LQ9NUG4 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 AP002414.2-201ENST00000591780 3365 ntBASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 PAN3-AS1-201ENST00000563843 1351 ntBASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 AL590787.1-201ENST00000568856 1315 ntBASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 RCN1P2-201ENST00000398357 915 ntBASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 SPDYE21P-201ENST00000413323 827 ntBASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 AC145285.3-201ENST00000564603 959 ntBASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
CCM2LQ9NUG4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms