Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 API5-211ENST00000534695 560 ntTSL 5 BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 TP53TG3HP-202ENST00000569755 579 ntBASIC16.83■□□□□ 0.28
HPS4Q9NQG7 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HPS4Q9NQG7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 AC007541.1-201ENST00000570282 1469 ntBASIC16.82■□□□□ 0.28
HPS4Q9NQG7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 ZNF890P-202ENST00000530367 1156 ntBASIC16.82■□□□□ 0.28
HPS4Q9NQG7 AC135586.1-201ENST00000539323 574 ntBASIC16.82■□□□□ 0.28
HPS4Q9NQG7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 AL512361.1-201ENST00000554200 418 ntBASIC16.82■□□□□ 0.28
HPS4Q9NQG7 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.82■□□□□ 0.28
HPS4Q9NQG7 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 GNAQP1-201ENST00000444815 1067 ntBASIC16.81■□□□□ 0.28
HPS4Q9NQG7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 AC010336.2-201ENST00000564226 506 ntBASIC16.81■□□□□ 0.28
HPS4Q9NQG7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.81■□□□□ 0.28
HPS4Q9NQG7 AC004790.1-201ENST00000612686 536 ntBASIC16.81■□□□□ 0.28
HPS4Q9NQG7 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms