Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 AC046158.3-201ENST00000624947 2558 ntBASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 AC010491.1-201ENST00000563101 2797 ntBASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
NEUROD4Q9HD90 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 AC092474.2-201ENST00000424288 719 ntBASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 DNAJB3-201ENST00000446806 729 ntBASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 AC245100.5-201ENST00000452108 331 ntBASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 AL365330.1-201ENST00000607459 531 ntBASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 BCAR1-209ENST00000546196 1340 ntBASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
NEUROD4Q9HD90 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 STK33P1-201ENST00000423835 1218 ntBASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 AC034105.1-201ENST00000563488 319 ntBASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.38■□□□□ 0.05
NEUROD4Q9HD90 AC140113.2-201ENST00000604370 208 ntBASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms