Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 AC087499.6-201ENST00000411576 835 ntBASIC18.89■□□□□ 0.61
SH2D4AQ9H788 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC18.89■□□□□ 0.61
SH2D4AQ9H788 AC114501.2-201ENST00000439631 535 ntBASIC18.89■□□□□ 0.61
SH2D4AQ9H788 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SH2D4AQ9H788 AC093004.1-201ENST00000508850 424 ntBASIC18.89■□□□□ 0.61
SH2D4AQ9H788 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.89■□□□□ 0.61
SH2D4AQ9H788 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.89■□□□□ 0.61
SH2D4AQ9H788 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SH2D4AQ9H788 AC140912.1-201ENST00000577171 1054 ntBASIC18.89■□□□□ 0.61
SH2D4AQ9H788 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SH2D4AQ9H788 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.89■□□□□ 0.61
SH2D4AQ9H788 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SH2D4AQ9H788 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SH2D4AQ9H788 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SH2D4AQ9H788 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SH2D4AQ9H788 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SH2D4AQ9H788 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SH2D4AQ9H788 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SH2D4AQ9H788 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SH2D4AQ9H788 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 CROCCP1-201ENST00000426910 5675 ntBASIC18.88■□□□□ 0.61
SH2D4AQ9H788 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 DOC2GP-202ENST00000514950 1163 ntBASIC18.88■□□□□ 0.61
SH2D4AQ9H788 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 AL596325.1-201ENST00000563991 1082 ntBASIC18.88■□□□□ 0.61
SH2D4AQ9H788 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 TP53TG3HP-202ENST00000569755 579 ntBASIC18.88■□□□□ 0.61
SH2D4AQ9H788 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 ACE-204ENST00000428043 5120 ntTSL 2 BASIC18.88■□□□□ 0.61
SH2D4AQ9H788 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 5S_rRNA.22-201ENST00000614916 106 ntBASIC18.87■□□□□ 0.61
SH2D4AQ9H788 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
SH2D4AQ9H788 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH2D4AQ9H788 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SH2D4AQ9H788 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH2D4AQ9H788 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC18.86■□□□□ 0.61
SH2D4AQ9H788 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH2D4AQ9H788 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms