Protein–RNA interactions for Protein: Q9H3P2

NELFA, Negative elongation factor A, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFAQ9H3P2 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 ACTG1P14-201ENST00000446382 1122 ntBASIC14.55□□□□□ -0.08
NELFAQ9H3P2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 RARRES2P8-201ENST00000566335 367 ntBASIC14.55□□□□□ -0.08
NELFAQ9H3P2 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 AL161645.1-201ENST00000622716 1255 ntBASIC14.55□□□□□ -0.08
NELFAQ9H3P2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
NELFAQ9H3P2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 AL513523.2-202ENST00000427283 2040 ntBASIC14.54□□□□□ -0.08
NELFAQ9H3P2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 MIR1233-2-201ENST00000408138 82 ntBASIC14.54□□□□□ -0.08
NELFAQ9H3P2 MIR1233-1-201ENST00000408722 82 ntBASIC14.54□□□□□ -0.08
NELFAQ9H3P2 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 CEND1P1-201ENST00000451006 455 ntBASIC14.54□□□□□ -0.08
NELFAQ9H3P2 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 WASH6P-202ENST00000359512 1437 ntBASIC14.54□□□□□ -0.08
NELFAQ9H3P2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 AC006449.6-201ENST00000612330 2296 ntBASIC14.54□□□□□ -0.08
NELFAQ9H3P2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.54□□□□□ -0.08
NELFAQ9H3P2 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
NELFAQ9H3P2 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 TSPY26P-202ENST00000565928 3884 ntBASIC14.53□□□□□ -0.08
NELFAQ9H3P2 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NELFAQ9H3P2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms