Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 SIGLEC30P-201ENST00000455569 941 ntBASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 AC020765.3-201ENST00000613051 740 ntBASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 AC011477.6-201ENST00000604980 1927 ntBASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SLIRPQ9GZT3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 AL928921.2-201ENST00000641325 2442 ntBASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 CICP20-201ENST00000443330 2801 ntBASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 REXO1L1P-202ENST00000608646 1974 ntBASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SLIRPQ9GZT3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 AC027601.5-201ENST00000624065 2482 ntBASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SLIRPQ9GZT3 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms