Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 AL365330.1-201ENST00000607459 531 ntBASIC16.9■□□□□ 0.3
LRRC3Q9BY71 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 MIR6069-201ENST00000620069 79 ntBASIC16.9■□□□□ 0.3
LRRC3Q9BY71 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 AC138969.3-201ENST00000546612 1459 ntBASIC16.9■□□□□ 0.3
LRRC3Q9BY71 AC138932.2-201ENST00000548268 1459 ntBASIC16.9■□□□□ 0.3
LRRC3Q9BY71 AC126755.4-201ENST00000549796 1459 ntBASIC16.9■□□□□ 0.3
LRRC3Q9BY71 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LRRC3Q9BY71 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.89■□□□□ 0.3
LRRC3Q9BY71 CYP4F24P-201ENST00000586049 1580 ntBASIC16.89■□□□□ 0.3
LRRC3Q9BY71 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 AC087499.6-201ENST00000411576 835 ntBASIC16.89■□□□□ 0.29
LRRC3Q9BY71 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 PTPA-220ENST00000436883 532 ntTSL 4 BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 WASH4P-201ENST00000564273 1246 ntBASIC16.89■□□□□ 0.29
LRRC3Q9BY71 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LRRC3Q9BY71 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 OR8S1-201ENST00000310194 1080 ntBASIC16.88■□□□□ 0.29
LRRC3Q9BY71 AC098614.1-201ENST00000368528 745 ntBASIC16.88■□□□□ 0.29
LRRC3Q9BY71 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC16.88■□□□□ 0.29
LRRC3Q9BY71 U91328.1-201ENST00000437528 223 ntBASIC16.88■□□□□ 0.29
LRRC3Q9BY71 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms