Protein–RNA interactions for Protein: Q99856

ARID3A, AT-rich interactive domain-containing protein 3A, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3AQ99856 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ARID3AQ99856 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 GSN-203ENST00000373808 2664 ntTSL 2 BASIC18.65■□□□□ 0.58
ARID3AQ99856 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ARID3AQ99856 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ARID3AQ99856 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ARID3AQ99856 AC117489.1-201ENST00000625169 3217 ntBASIC18.64■□□□□ 0.58
ARID3AQ99856 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
ARID3AQ99856 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
ARID3AQ99856 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ARID3AQ99856 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
ARID3AQ99856 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC18.64■□□□□ 0.57
ARID3AQ99856 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
ARID3AQ99856 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC18.64■□□□□ 0.57
ARID3AQ99856 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
ARID3AQ99856 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.64■□□□□ 0.57
ARID3AQ99856 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ARID3AQ99856 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.64■□□□□ 0.57
ARID3AQ99856 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.64■□□□□ 0.57
ARID3AQ99856 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.64■□□□□ 0.57
ARID3AQ99856 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.64■□□□□ 0.57
ARID3AQ99856 FGFR3P6-201ENST00000457012 610 ntBASIC18.64■□□□□ 0.57
ARID3AQ99856 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.64■□□□□ 0.57
ARID3AQ99856 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.64■□□□□ 0.57
ARID3AQ99856 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.64■□□□□ 0.57
ARID3AQ99856 MTDHP3-201ENST00000594186 672 ntBASIC18.64■□□□□ 0.57
ARID3AQ99856 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 AC008608.2-201ENST00000606089 416 ntBASIC18.64■□□□□ 0.57
ARID3AQ99856 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 AL355877.3-201ENST00000622820 899 ntBASIC18.64■□□□□ 0.57
ARID3AQ99856 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
ARID3AQ99856 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ARID3AQ99856 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ARID3AQ99856 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC18.64■□□□□ 0.57
ARID3AQ99856 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ARID3AQ99856 AC023908.3-201ENST00000564211 3047 ntBASIC18.63■□□□□ 0.57
ARID3AQ99856 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
ARID3AQ99856 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC18.63■□□□□ 0.57
ARID3AQ99856 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC18.63■□□□□ 0.57
ARID3AQ99856 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC18.63■□□□□ 0.57
ARID3AQ99856 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.63■□□□□ 0.57
ARID3AQ99856 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC18.63■□□□□ 0.57
ARID3AQ99856 RBM17P3-201ENST00000417687 1192 ntBASIC18.63■□□□□ 0.57
ARID3AQ99856 AL020989.1-201ENST00000422979 469 ntBASIC18.63■□□□□ 0.57
ARID3AQ99856 SAPCD2P3-201ENST00000455031 850 ntBASIC18.63■□□□□ 0.57
ARID3AQ99856 EMBP1-201ENST00000458200 901 ntBASIC18.63■□□□□ 0.57
ARID3AQ99856 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.63■□□□□ 0.57
ARID3AQ99856 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.63■□□□□ 0.57
ARID3AQ99856 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.63■□□□□ 0.57
ARID3AQ99856 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC18.63■□□□□ 0.57
ARID3AQ99856 SIGLEC16-201ENST00000599858 1437 ntBASIC18.63■□□□□ 0.57
ARID3AQ99856 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ARID3AQ99856 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ARID3AQ99856 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ARID3AQ99856 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
ARID3AQ99856 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
ARID3AQ99856 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
ARID3AQ99856 AC026748.1-201ENST00000624349 3251 ntBASIC18.62■□□□□ 0.57
ARID3AQ99856 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ARID3AQ99856 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
ARID3AQ99856 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ARID3AQ99856 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ARID3AQ99856 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.62■□□□□ 0.57
ARID3AQ99856 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.62■□□□□ 0.57
ARID3AQ99856 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms