Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.28■□□□□ 0.2
CPNE1Q99829 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.28■□□□□ 0.2
CPNE1Q99829 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE1Q99829 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE1Q99829 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE1Q99829 AL078644.1-201ENST00000609881 752 ntBASIC16.28■□□□□ 0.2
CPNE1Q99829 AL031008.1-201ENST00000619963 541 ntBASIC16.28■□□□□ 0.2
CPNE1Q99829 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CPNE1Q99829 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE1Q99829 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE1Q99829 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CPNE1Q99829 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPNE1Q99829 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPNE1Q99829 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPNE1Q99829 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE1Q99829 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CPNE1Q99829 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE1Q99829 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CPNE1Q99829 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.28■□□□□ 0.2
CPNE1Q99829 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.27■□□□□ 0.2
CPNE1Q99829 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE1Q99829 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE1Q99829 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE1Q99829 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE1Q99829 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.27■□□□□ 0.2
CPNE1Q99829 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE1Q99829 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
CPNE1Q99829 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE1Q99829 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE1Q99829 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE1Q99829 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE1Q99829 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE1Q99829 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.27■□□□□ 0.2
CPNE1Q99829 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.27■□□□□ 0.2
CPNE1Q99829 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.27■□□□□ 0.2
CPNE1Q99829 AC092474.2-201ENST00000424288 719 ntBASIC16.27■□□□□ 0.2
CPNE1Q99829 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.27■□□□□ 0.2
CPNE1Q99829 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE1Q99829 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.27■□□□□ 0.2
CPNE1Q99829 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CPNE1Q99829 RN7SL510P-201ENST00000581311 263 ntBASIC16.27■□□□□ 0.2
CPNE1Q99829 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE1Q99829 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE1Q99829 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.2
CPNE1Q99829 AC116407.3-201ENST00000623905 1129 ntBASIC16.27■□□□□ 0.2
CPNE1Q99829 AC010507.1-201ENST00000633895 436 ntBASIC16.27■□□□□ 0.2
CPNE1Q99829 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE1Q99829 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.27■□□□□ 0.2
CPNE1Q99829 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.27■□□□□ 0.2
CPNE1Q99829 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CPNE1Q99829 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE1Q99829 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE1Q99829 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE1Q99829 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CPNE1Q99829 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CPNE1Q99829 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.27■□□□□ 0.19
CPNE1Q99829 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.27■□□□□ 0.19
CPNE1Q99829 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.27■□□□□ 0.19
CPNE1Q99829 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CPNE1Q99829 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
CPNE1Q99829 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC16.27■□□□□ 0.19
CPNE1Q99829 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.27■□□□□ 0.19
CPNE1Q99829 AC011270.2-201ENST00000624293 2550 ntBASIC16.27■□□□□ 0.19
CPNE1Q99829 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.26■□□□□ 0.19
CPNE1Q99829 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE1Q99829 CASK-202ENST00000378158 3848 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE1Q99829 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE1Q99829 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE1Q99829 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE1Q99829 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE1Q99829 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.26■□□□□ 0.19
CPNE1Q99829 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE1Q99829 AC073347.1-201ENST00000421633 2643 ntBASIC16.26■□□□□ 0.19
CPNE1Q99829 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
CPNE1Q99829 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE1Q99829 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE1Q99829 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE1Q99829 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE1Q99829 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.26■□□□□ 0.19
CPNE1Q99829 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE1Q99829 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE1Q99829 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CPNE1Q99829 AC093909.1-201ENST00000504731 1122 ntBASIC16.26■□□□□ 0.19
CPNE1Q99829 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
CPNE1Q99829 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CPNE1Q99829 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.26■□□□□ 0.19
CPNE1Q99829 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms