Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 NFIC-211ENST00000641145 8399 ntBASIC16■□□□□ 0.15
NPAS2Q99743 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16■□□□□ 0.15
NPAS2Q99743 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS2Q99743 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS2Q99743 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS2Q99743 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16■□□□□ 0.15
NPAS2Q99743 KRT18P13-201ENST00000400056 1290 ntBASIC16■□□□□ 0.15
NPAS2Q99743 PTCHD3P3-201ENST00000403073 906 ntBASIC16■□□□□ 0.15
NPAS2Q99743 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16■□□□□ 0.15
NPAS2Q99743 KRT18P2-201ENST00000447938 1258 ntBASIC16■□□□□ 0.15
NPAS2Q99743 AC092865.5-201ENST00000545435 363 ntBASIC16■□□□□ 0.15
NPAS2Q99743 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16■□□□□ 0.15
NPAS2Q99743 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16■□□□□ 0.15
NPAS2Q99743 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16■□□□□ 0.15
NPAS2Q99743 AC064836.3-201ENST00000607928 673 ntBASIC16■□□□□ 0.15
NPAS2Q99743 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16■□□□□ 0.15
NPAS2Q99743 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16■□□□□ 0.15
NPAS2Q99743 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16■□□□□ 0.15
NPAS2Q99743 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
NPAS2Q99743 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS2Q99743 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NPAS2Q99743 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS2Q99743 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NPAS2Q99743 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16■□□□□ 0.15
NPAS2Q99743 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPAS2Q99743 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16■□□□□ 0.15
NPAS2Q99743 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
NPAS2Q99743 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.99■□□□□ 0.15
NPAS2Q99743 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS2Q99743 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS2Q99743 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
NPAS2Q99743 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS2Q99743 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
NPAS2Q99743 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC15.99■□□□□ 0.15
NPAS2Q99743 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.99■□□□□ 0.15
NPAS2Q99743 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS2Q99743 BX842568.4-201ENST00000421222 227 ntBASIC15.99■□□□□ 0.15
NPAS2Q99743 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.99■□□□□ 0.15
NPAS2Q99743 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS2Q99743 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC15.99■□□□□ 0.15
NPAS2Q99743 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.99■□□□□ 0.15
NPAS2Q99743 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC15.99■□□□□ 0.15
NPAS2Q99743 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.99■□□□□ 0.15
NPAS2Q99743 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC15.99■□□□□ 0.15
NPAS2Q99743 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.99■□□□□ 0.15
NPAS2Q99743 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.99■□□□□ 0.15
NPAS2Q99743 AC139530.3-201ENST00000620344 690 ntBASIC15.99■□□□□ 0.15
NPAS2Q99743 AC004790.2-201ENST00000623588 572 ntBASIC15.99■□□□□ 0.15
NPAS2Q99743 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.99■□□□□ 0.15
NPAS2Q99743 AL805961.1-202ENST00000641562 540 ntBASIC15.99■□□□□ 0.15
NPAS2Q99743 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS2Q99743 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS2Q99743 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
NPAS2Q99743 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS2Q99743 CDC14C-201ENST00000428251 1719 ntBASIC15.99■□□□□ 0.15
NPAS2Q99743 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.99■□□□□ 0.15
NPAS2Q99743 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS2Q99743 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NPAS2Q99743 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
NPAS2Q99743 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS2Q99743 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.99■□□□□ 0.15
NPAS2Q99743 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
NPAS2Q99743 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.99■□□□□ 0.15
NPAS2Q99743 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.99■□□□□ 0.15
NPAS2Q99743 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS2Q99743 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NPAS2Q99743 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
NPAS2Q99743 AC112504.1-201ENST00000623415 1841 ntBASIC15.98■□□□□ 0.15
NPAS2Q99743 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC15.98■□□□□ 0.15
NPAS2Q99743 LINC02447-202ENST00000501888 2146 ntBASIC15.98■□□□□ 0.15
NPAS2Q99743 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.98■□□□□ 0.15
NPAS2Q99743 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.98■□□□□ 0.15
NPAS2Q99743 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.98■□□□□ 0.15
NPAS2Q99743 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC15.98■□□□□ 0.15
NPAS2Q99743 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.98■□□□□ 0.15
NPAS2Q99743 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.98■□□□□ 0.15
NPAS2Q99743 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.98■□□□□ 0.15
NPAS2Q99743 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.98■□□□□ 0.15
NPAS2Q99743 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.98■□□□□ 0.15
NPAS2Q99743 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.98■□□□□ 0.15
NPAS2Q99743 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NPAS2Q99743 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms