Protein–RNA interactions for Protein: Q96PG1

MS4A4E, Putative membrane-spanning 4-domains subfamily A member 4E, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A4EQ96PG1 YBX2P1-201ENST00000394192 760 ntBASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 AC004832.2-201ENST00000426397 482 ntBASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 ADH5P3-201ENST00000433842 1137 ntBASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 AC073389.1-201ENST00000595595 795 ntBASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 AC092902.6-201ENST00000641783 218 ntBASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 AC008741.2-201ENST00000612792 3115 ntBASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 AC007950.2-201ENST00000615045 2347 ntBASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
MS4A4EQ96PG1 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 HAUS4P1-201ENST00000406739 1145 ntBASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 TFAMP1-201ENST00000412727 736 ntBASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 AL671277.1-201ENST00000429656 993 ntBASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 MIR4321-201ENST00000592276 80 ntBASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 AC010491.1-201ENST00000563101 2797 ntBASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.19■□□□□ 0.02
MS4A4EQ96PG1 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 ACTG1P14-201ENST00000446382 1122 ntBASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 C20orf181-201ENST00000623918 480 ntBASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 AC008267.7-201ENST00000624570 1194 ntBASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
MS4A4EQ96PG1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms