Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19■□□□□ 0.63
TRIM47Q96LD4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19■□□□□ 0.63
TRIM47Q96LD4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
TRIM47Q96LD4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19■□□□□ 0.63
TRIM47Q96LD4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 AC078925.2-201ENST00000624013 1973 ntBASIC18.99■□□□□ 0.63
TRIM47Q96LD4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 FAM220BP-201ENST00000377689 816 ntBASIC18.99■□□□□ 0.63
TRIM47Q96LD4 AC092658.1-201ENST00000505836 891 ntBASIC18.99■□□□□ 0.63
TRIM47Q96LD4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 ZNF890P-202ENST00000530367 1156 ntBASIC18.99■□□□□ 0.63
TRIM47Q96LD4 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 AL133215.2-201ENST00000609242 977 ntBASIC18.99■□□□□ 0.63
TRIM47Q96LD4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 FRMD8P1-201ENST00000440433 1524 ntBASIC18.99■□□□□ 0.63
TRIM47Q96LD4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
TRIM47Q96LD4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 AC105021.1-202ENST00000570572 669 ntBASIC18.98■□□□□ 0.63
TRIM47Q96LD4 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
TRIM47Q96LD4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 STARD13-205ENST00000439831 945 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 DOC2GP-202ENST00000514950 1163 ntBASIC18.97■□□□□ 0.63
TRIM47Q96LD4 AL079307.3-201ENST00000556114 283 ntBASIC18.97■□□□□ 0.63
TRIM47Q96LD4 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 MIR4259-201ENST00000584466 101 ntBASIC18.97■□□□□ 0.63
TRIM47Q96LD4 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
TRIM47Q96LD4 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms