Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 MIR4321-201ENST00000592276 80 ntBASIC15.66■□□□□ 0.1
UBE2E3Q969T4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 AC026120.1-201ENST00000611536 926 ntBASIC15.66■□□□□ 0.1
UBE2E3Q969T4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 AC067930.6-201ENST00000623257 4947 ntBASIC15.66■□□□□ 0.1
UBE2E3Q969T4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC15.66■□□□□ 0.1
UBE2E3Q969T4 AC018695.7-201ENST00000624587 2492 ntBASIC15.66■□□□□ 0.1
UBE2E3Q969T4 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 PCDHA1-201ENST00000378133 2726 ntBASIC15.65■□□□□ 0.1
UBE2E3Q969T4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 KRT8P23-201ENST00000560090 1207 ntBASIC15.65■□□□□ 0.1
UBE2E3Q969T4 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 AC027307.2-201ENST00000591252 911 ntBASIC15.65■□□□□ 0.1
UBE2E3Q969T4 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 SPTSSB-204ENST00000617024 1292 ntBASIC15.65■□□□□ 0.1
UBE2E3Q969T4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
UBE2E3Q969T4 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 AL603832.2-201ENST00000566195 2125 ntBASIC15.64■□□□□ 0.09
UBE2E3Q969T4 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 HTR5BP-201ENST00000430851 1154 ntBASIC15.64■□□□□ 0.09
UBE2E3Q969T4 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 IGHV3-62-201ENST00000520057 340 ntBASIC15.64■□□□□ 0.09
UBE2E3Q969T4 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.64■□□□□ 0.09
UBE2E3Q969T4 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 2963 ms