Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TMEM54Q969K7 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM54Q969K7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM54Q969K7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM54Q969K7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM54Q969K7 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM54Q969K7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.3□□□□□ -0.12
TMEM54Q969K7 ALG1L8P-201ENST00000533887 760 ntBASIC14.3□□□□□ -0.12
TMEM54Q969K7 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM54Q969K7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
TMEM54Q969K7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM54Q969K7 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.3□□□□□ -0.12
TMEM54Q969K7 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.3□□□□□ -0.12
TMEM54Q969K7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM54Q969K7 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM54Q969K7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM54Q969K7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM54Q969K7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM54Q969K7 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM54Q969K7 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM54Q969K7 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
TMEM54Q969K7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.3□□□□□ -0.12
TMEM54Q969K7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.3□□□□□ -0.12
TMEM54Q969K7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 GPS2P2-201ENST00000430745 888 ntBASIC14.29□□□□□ -0.12
TMEM54Q969K7 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 AC134684.3-201ENST00000641758 218 ntBASIC14.29□□□□□ -0.12
TMEM54Q969K7 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 AL691432.1-201ENST00000596308 1422 ntBASIC14.29□□□□□ -0.12
TMEM54Q969K7 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TMEM54Q969K7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM54Q969K7 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM54Q969K7 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 RPS8P6-201ENST00000426177 609 ntBASIC14.28□□□□□ -0.12
TMEM54Q969K7 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 AC004967.1-201ENST00000453589 447 ntBASIC14.28□□□□□ -0.12
TMEM54Q969K7 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TMEM54Q969K7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms