Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.87■□□□□ 0.77
RPGRQ92834 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPGRQ92834 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPGRQ92834 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPGRQ92834 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPGRQ92834 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPGRQ92834 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPGRQ92834 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPGRQ92834 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPGRQ92834 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.87■□□□□ 0.77
RPGRQ92834 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC19.87■□□□□ 0.77
RPGRQ92834 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC19.87■□□□□ 0.77
RPGRQ92834 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
RPGRQ92834 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.87■□□□□ 0.77
RPGRQ92834 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.87■□□□□ 0.77
RPGRQ92834 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RPGRQ92834 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC19.87■□□□□ 0.77
RPGRQ92834 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC19.87■□□□□ 0.77
RPGRQ92834 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC19.87■□□□□ 0.77
RPGRQ92834 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC19.87■□□□□ 0.77
RPGRQ92834 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.87■□□□□ 0.77
RPGRQ92834 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC19.87■□□□□ 0.77
RPGRQ92834 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPGRQ92834 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPGRQ92834 LETM1P2-201ENST00000597330 2178 ntBASIC19.87■□□□□ 0.77
RPGRQ92834 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.86■□□□□ 0.77
RPGRQ92834 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC19.86■□□□□ 0.77
RPGRQ92834 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RPGRQ92834 OR6D1P-203ENST00000641209 4860 ntBASIC19.86■□□□□ 0.77
RPGRQ92834 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19.86■□□□□ 0.77
RPGRQ92834 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.86■□□□□ 0.77
RPGRQ92834 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RPGRQ92834 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RPGRQ92834 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 CTBP2P5-201ENST00000454986 1264 ntBASIC19.86■□□□□ 0.77
RPGRQ92834 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC19.86■□□□□ 0.77
RPGRQ92834 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
RPGRQ92834 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC19.86■□□□□ 0.77
RPGRQ92834 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC19.86■□□□□ 0.77
RPGRQ92834 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RPGRQ92834 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC19.86■□□□□ 0.77
RPGRQ92834 AC243562.2-201ENST00000561247 970 ntBASIC19.86■□□□□ 0.77
RPGRQ92834 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC19.86■□□□□ 0.77
RPGRQ92834 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC19.86■□□□□ 0.77
RPGRQ92834 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.86■□□□□ 0.77
RPGRQ92834 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RPGRQ92834 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC19.86■□□□□ 0.77
RPGRQ92834 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.86■□□□□ 0.77
RPGRQ92834 PDIA3P1-201ENST00000471856 1510 ntBASIC19.86■□□□□ 0.77
RPGRQ92834 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPGRQ92834 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC19.86■□□□□ 0.77
RPGRQ92834 KRT8P37-201ENST00000451609 1420 ntBASIC19.85■□□□□ 0.77
RPGRQ92834 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RPGRQ92834 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.85■□□□□ 0.77
RPGRQ92834 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRQ92834 AC005915.1-201ENST00000624912 2018 ntBASIC19.85■□□□□ 0.77
RPGRQ92834 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRQ92834 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC19.85■□□□□ 0.77
RPGRQ92834 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RPGRQ92834 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRQ92834 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRQ92834 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRQ92834 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.85■□□□□ 0.77
RPGRQ92834 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.85■□□□□ 0.77
RPGRQ92834 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC19.85■□□□□ 0.77
RPGRQ92834 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRQ92834 RPL13P2-201ENST00000440687 659 ntBASIC19.85■□□□□ 0.77
RPGRQ92834 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC19.85■□□□□ 0.77
RPGRQ92834 KLF2P4-201ENST00000451959 1225 ntBASIC19.85■□□□□ 0.77
RPGRQ92834 TDH-203ENST00000531764 1110 ntBASIC19.85■□□□□ 0.77
RPGRQ92834 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.85■□□□□ 0.77
RPGRQ92834 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.85■□□□□ 0.77
RPGRQ92834 MIR5189-201ENST00000577370 114 ntBASIC19.85■□□□□ 0.77
RPGRQ92834 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC19.85■□□□□ 0.77
RPGRQ92834 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC19.85■□□□□ 0.77
RPGRQ92834 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.85■□□□□ 0.77
RPGRQ92834 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC19.85■□□□□ 0.77
RPGRQ92834 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRQ92834 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRQ92834 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRQ92834 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRQ92834 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRQ92834 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRQ92834 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPGRQ92834 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms