Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.29■□□□□ 0.36
DDX1Q92499 FAM86C2P-203ENST00000528684 1004 ntBASIC17.29■□□□□ 0.36
DDX1Q92499 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.29■□□□□ 0.36
DDX1Q92499 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.29■□□□□ 0.36
DDX1Q92499 RPL28-205ENST00000558131 444 ntTSL 5 BASIC17.29■□□□□ 0.36
DDX1Q92499 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.29■□□□□ 0.36
DDX1Q92499 AC061975.2-201ENST00000581722 295 ntBASIC17.29■□□□□ 0.36
DDX1Q92499 AC005498.2-205ENST00000593218 784 ntBASIC17.29■□□□□ 0.36
DDX1Q92499 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.29■□□□□ 0.36
DDX1Q92499 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC17.29■□□□□ 0.36
DDX1Q92499 SPTSSB-204ENST00000617024 1292 ntBASIC17.29■□□□□ 0.36
DDX1Q92499 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC17.29■□□□□ 0.36
DDX1Q92499 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.29■□□□□ 0.36
DDX1Q92499 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.29■□□□□ 0.36
DDX1Q92499 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC17.29■□□□□ 0.36
DDX1Q92499 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.29■□□□□ 0.36
DDX1Q92499 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX1Q92499 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DDX1Q92499 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
DDX1Q92499 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.29■□□□□ 0.36
DDX1Q92499 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.29■□□□□ 0.36
DDX1Q92499 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
DDX1Q92499 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.29■□□□□ 0.36
DDX1Q92499 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.28■□□□□ 0.36
DDX1Q92499 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX1Q92499 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
DDX1Q92499 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DDX1Q92499 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
DDX1Q92499 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
DDX1Q92499 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.28■□□□□ 0.36
DDX1Q92499 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.28■□□□□ 0.36
DDX1Q92499 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX1Q92499 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
DDX1Q92499 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
DDX1Q92499 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
DDX1Q92499 HAUS4P1-201ENST00000406739 1145 ntBASIC17.28■□□□□ 0.36
DDX1Q92499 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.28■□□□□ 0.36
DDX1Q92499 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.28■□□□□ 0.36
DDX1Q92499 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DDX1Q92499 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.28■□□□□ 0.36
DDX1Q92499 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.28■□□□□ 0.36
DDX1Q92499 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.28■□□□□ 0.36
DDX1Q92499 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DDX1Q92499 AC026120.1-201ENST00000611536 926 ntBASIC17.28■□□□□ 0.36
DDX1Q92499 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.28■□□□□ 0.36
DDX1Q92499 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.28■□□□□ 0.36
DDX1Q92499 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DDX1Q92499 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.28■□□□□ 0.36
DDX1Q92499 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX1Q92499 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX1Q92499 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX1Q92499 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.28■□□□□ 0.36
DDX1Q92499 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
DDX1Q92499 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
DDX1Q92499 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
DDX1Q92499 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.28■□□□□ 0.36
DDX1Q92499 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC17.28■□□□□ 0.36
DDX1Q92499 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX1Q92499 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX1Q92499 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
DDX1Q92499 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX1Q92499 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.27■□□□□ 0.36
DDX1Q92499 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX1Q92499 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
DDX1Q92499 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX1Q92499 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DDX1Q92499 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.27■□□□□ 0.36
DDX1Q92499 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX1Q92499 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
DDX1Q92499 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.27■□□□□ 0.36
DDX1Q92499 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC17.27■□□□□ 0.36
DDX1Q92499 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX1Q92499 AL162727.3-201ENST00000635661 2787 ntBASIC17.27■□□□□ 0.36
DDX1Q92499 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX1Q92499 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.27■□□□□ 0.36
DDX1Q92499 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
DDX1Q92499 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX1Q92499 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.27■□□□□ 0.36
DDX1Q92499 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC17.27■□□□□ 0.36
DDX1Q92499 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX1Q92499 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX1Q92499 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.27■□□□□ 0.36
DDX1Q92499 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX1Q92499 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC17.27■□□□□ 0.36
DDX1Q92499 GAPDHP21-201ENST00000450301 1010 ntBASIC17.27■□□□□ 0.36
DDX1Q92499 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC17.27■□□□□ 0.36
DDX1Q92499 RN7SL589P-201ENST00000481268 310 ntBASIC17.27■□□□□ 0.36
DDX1Q92499 INGX-202ENST00000489074 768 ntBASIC17.27■□□□□ 0.36
DDX1Q92499 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.27■□□□□ 0.36
DDX1Q92499 AC079140.1-201ENST00000508039 487 ntBASIC17.27■□□□□ 0.36
DDX1Q92499 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.27■□□□□ 0.36
DDX1Q92499 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.27■□□□□ 0.36
DDX1Q92499 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC17.27■□□□□ 0.36
DDX1Q92499 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.27■□□□□ 0.36
DDX1Q92499 AL513210.1-201ENST00000629608 234 ntBASIC17.27■□□□□ 0.36
DDX1Q92499 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
DDX1Q92499 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
DDX1Q92499 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC17.27■□□□□ 0.36
DDX1Q92499 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC17.27■□□□□ 0.36
DDX1Q92499 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms