Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLC44A1Q8WWI5 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 CICP13-201ENST00000422015 2789 ntBASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 AL450487.1-201ENST00000426799 995 ntBASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 AC245100.5-201ENST00000452108 331 ntBASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 CXCL1P1-201ENST00000502804 216 ntBASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 AP002469.2-201ENST00000531724 424 ntBASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 AC012640.2-201ENST00000561606 901 ntBASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 AL109954.1-202ENST00000564051 2148 ntBASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 AL031432.2-201ENST00000566714 459 ntBASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 AL928711.1-201ENST00000570165 459 ntBASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 AC099063.4-201ENST00000641099 1602 ntBASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 AL645728.2-201ENST00000641974 660 ntBASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLC44A1Q8WWI5 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 HNRNPDP1-201ENST00000439535 754 ntBASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 AC068418.2-201ENST00000577309 3703 ntBASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLC44A1Q8WWI5 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.3■□□□□ 0.2
SLC44A1Q8WWI5 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms