Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 AL603832.2-201ENST00000566195 2125 ntBASIC16.55■□□□□ 0.24
PTCD2Q8WV60 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTCD2Q8WV60 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 AC092850.2-201ENST00000623821 2697 ntBASIC16.54■□□□□ 0.24
PTCD2Q8WV60 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 AC020892.1-201ENST00000559918 855 ntTSL 2 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 AC022145.2-201ENST00000598203 171 ntBASIC16.54■□□□□ 0.24
PTCD2Q8WV60 AL513210.1-201ENST00000629608 234 ntBASIC16.54■□□□□ 0.24
PTCD2Q8WV60 AC079781.4-201ENST00000641908 219 ntBASIC16.54■□□□□ 0.24
PTCD2Q8WV60 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTCD2Q8WV60 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 AC002056.1-201ENST00000395613 760 ntBASIC16.53■□□□□ 0.24
PTCD2Q8WV60 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 AC092474.2-201ENST00000424288 719 ntBASIC16.53■□□□□ 0.24
PTCD2Q8WV60 AL671277.1-201ENST00000429656 993 ntBASIC16.53■□□□□ 0.24
PTCD2Q8WV60 ACTG1P14-201ENST00000446382 1122 ntBASIC16.53■□□□□ 0.24
PTCD2Q8WV60 TIMM8BP1-201ENST00000452384 211 ntBASIC16.53■□□□□ 0.24
PTCD2Q8WV60 KRT18P34-201ENST00000488218 1270 ntBASIC16.53■□□□□ 0.24
PTCD2Q8WV60 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 AC092953.2-201ENST00000608000 699 ntBASIC16.53■□□□□ 0.24
PTCD2Q8WV60 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PTCD2Q8WV60 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms