Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 AC098859.1-201ENST00000502915 1238 ntBASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 LINC01225-203ENST00000563550 1244 ntBASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 AC026120.1-201ENST00000611536 926 ntBASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PCDH19Q8TAB3 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 AC142381.1-201ENST00000426099 345 ntBASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 SPCS2P4-201ENST00000436160 681 ntBASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 MKNK2P1-201ENST00000437526 628 ntBASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 AC079140.1-201ENST00000508039 487 ntBASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 SNHG9-202ENST00000564014 471 ntBASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 SPTSSB-204ENST00000617024 1292 ntBASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 ELL2P1-201ENST00000413990 1906 ntBASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDH19Q8TAB3 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 AP005117.1-202ENST00000581724 1908 ntBASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 HAUS4P1-201ENST00000406739 1145 ntBASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 SPDYE11-202ENST00000450699 704 ntBASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 CEND1P1-201ENST00000451006 455 ntBASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 AC245100.5-201ENST00000452108 331 ntBASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDH19Q8TAB3 RN7SL589P-201ENST00000481268 310 ntBASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms